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OPENSEQ.org

RUVA - RUVC
UniProt: P0A809 - P0A814
Length: 376
Sequences: 744
Seq/Len: 2.03
I_Prob: 0.04

RUVA - Holliday junction ATP-dependent DNA helicase RuvA
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RUVA
RUVC - Crossover junction endodeoxyribonuclease RuvC
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RUVC
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
130_D 17_G 1.25 0.04
170_L 139_D 1.16 0.03
192_E 78_A 1.09 0.03
196_R 68_Q 1.07 0.03
43_Q 32_G 1.07 0.03
61_Y 63_Y 1.06 0.02
202_A 149_T 1.05 0.02
8_I 27_S 1.04 0.02
69_R 116_S 1.02 0.02
189_A 99_V 1.00 0.02
26_Y 85_R 0.99 0.02
21_V 151_C 0.99 0.02
114_P 83_Q 0.97 0.02
90_L 19_I 0.95 0.02
61_Y 59_F 0.94 0.02
67_Q 36_T 0.92 0.02
78_T 141_A 0.92 0.01
51_F 66_I 0.92 0.01
17_V 73_K 0.91 0.01
166_A 111_V 0.91 0.01
65_N 145_A 0.90 0.01
153_S 59_F 0.90 0.01
142_P 59_F 0.89 0.01
49_T 136_P 0.89 0.01
81_V 134_A 0.89 0.01
106_E 148_I 0.89 0.01
23_G 125_M 0.88 0.01
169_A 136_P 0.88 0.01
196_R 70_F 0.87 0.01
19_I 50_A 0.86 0.01
196_R 107_V 0.86 0.01
132_F 48_I 0.86 0.01
6_R 24_R 0.85 0.01
9_I 73_K 0.85 0.01
28_V 25_Q 0.84 0.01
176_E 109_Q 0.83 0.01
194_L 131_K 0.83 0.01
86_A 129_L 0.83 0.01
36_Y 123_Q 0.83 0.01
21_V 66_I 0.82 0.01
172_Y 71_M 0.82 0.01
164_V 66_I 0.81 0.01
54_R 152_H 0.81 0.01
108_G 77_S 0.81 0.01
102_V 148_I 0.80 0.01
91_S 59_F 0.80 0.01
124_L 33_C 0.80 0.01
89_I 83_Q 0.80 0.01
3_G 23_G 0.80 0.01
21_V 5_L 0.80 0.01
172_Y 30_G 0.79 0.01
154_P 160_M 0.79 0.01
48_F 149_T 0.78 0.01
181_V 51_G 0.78 0.01
46_I 98_P 0.78 0.01
126_V 132_L 0.78 0.01
26_Y 59_F 0.78 0.01
13_Q 90_V 0.77 0.01
76_I 13_V 0.77 0.01
18_L 141_A 0.77 0.01
46_I 129_L 0.77 0.01
75_L 84_A 0.76 0.01
67_Q 43_S 0.76 0.01
52_V 126_V 0.76 0.01
106_E 51_G 0.76 0.01
22_G 129_L 0.75 0.01
123_R 65_A 0.75 0.01
53_V 18_V 0.75 0.01
119_K 17_G 0.75 0.01
177_A 35_R 0.74 0.01
65_N 148_I 0.74 0.01
83_P 7_I 0.73 0.01
178_S 97_L 0.73 0.01
177_A 147_A 0.72 0.01
129_K 86_G 0.72 0.01
184_I 146_I 0.72 0.01
132_F 89_I 0.72 0.01
9_I 127_R 0.72 0.01
191_S 40_D 0.72 0.01
19_I 40_D 0.72 0.01
121_A 117_A 0.72 0.01
49_T 69_V 0.72 0.01
97_Q 48_I 0.71 0.01
50_H 16_Y 0.71 0.01
83_P 90_V 0.71 0.01
118_K 151_C 0.71 0.01
83_P 91_A 0.70 0.01
116_I 82_G 0.70 0.01
189_A 111_V 0.70 0.01
121_A 86_G 0.70 0.01
73_K 86_G 0.70 0.01
199_L 125_M 0.70 0.01
139_L 49_Y 0.70 0.01
126_V 103_A 0.70 0.01
107_V 107_V 0.69 0.01
203_L 153_V 0.69 0.01
69_R 123_Q 0.69 0.01
123_R 101_E 0.69 0.01
50_H 12_R 0.69 0.01
132_F 87_V 0.69 0.01
132_F 146_I 0.69 0.01
114_P 132_L 0.69 0.01
9_I 68_Q 0.69 0.01
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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