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OPENSEQ.org
RS16 - TRMD
UniProt: P0A7T3 - P0A873
Length: 337
Sequences: 1081
Seq/Len: 3.36
I_Prob: 0.00
RS16 - 30S ribosomal protein S16
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: RS16 		TRMD - tRNA (guanine-N(1)-)-methyltransferase
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: TRMD
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
35_R 169_D 0.78 0.00
76_K 156_I 0.76 0.00
33_I 146_M 0.71 0.00
61_V 16_I 0.71 0.00
1_M 177_D 0.70 0.00
7_A 122_V 0.70 0.00
40_N 185_E 0.69 0.00
19_V 49_V 0.69 0.00
23_D 1_M 0.69 0.00
19_V 101_E 0.67 0.00
19_V 136_Y 0.65 0.00
12_K 8_L 0.64 0.00
11_A 162_H 0.63 0.00
62_G 74_A 0.63 0.00
74_L 213_L 0.62 0.00
68_S 38_P 0.62 0.00
74_L 54_Y 0.62 0.00
36_V 76_A 0.61 0.00
38_F 20_G 0.61 0.00
5_R 169_D 0.61 0.00
22_A 17_T 0.61 0.00
32_F 7_S 0.60 0.00
71_V 156_I 0.60 0.00
72_A 156_I 0.58 0.00
66_T 2_W 0.58 0.00
66_T 133_I 0.58 0.00
42_I 180_H 0.58 0.00
7_A 114_R 0.57 0.00
14_R 109_I 0.56 0.00
43_A 37_S 0.56 0.00
3_T 58_P 0.56 0.00
60_W 150_D 0.55 0.00
6_L 25_A 0.55 0.00
72_A 123_I 0.55 0.00
14_R 200_N 0.55 0.00
68_S 195_V 0.55 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions (includes both intra and inter preds)
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