May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

KEFG - YTFH
UniProt: P0A756 - P0ACN2
Length: 310
Sequences: 284
Seq/Len: 1.00
I_Prob: 0.04

KEFG - Glutathione-regulated potassium-efflux system ancillary protein KefG
Paralog alert: 0.61 [within 20: 0.03] - ratio of genomes with paralogs
Cluster includes: AZOR KEFF KEFG MDAB NQOR YCAK
YTFH - Uncharacterized HTH-type transcriptional regulator YtfH
Paralog alert: 0.44 [within 20: 0.08] - ratio of genomes with paralogs
Cluster includes: YTFH
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
74_Y 58_V 1.55 0.04
63_E 93_T 1.17 0.01
43_A 100_S 1.12 0.01
129_M 62_M 1.12 0.01
148_L 51_L 1.10 0.01
74_Y 65_Q 1.10 0.01
91_G 48_F 1.09 0.01
63_E 62_M 1.08 0.01
103_G 64_A 1.05 0.01
75_S 29_V 1.01 0.01
28_K 59_S 1.01 0.01
71_L 56_G 0.99 0.01
42_Y 91_S 0.99 0.01
62_H 68_Q 0.98 0.01
52_I 51_L 0.98 0.01
31_T 112_L 0.96 0.01
149_S 51_L 0.96 0.01
112_T 37_I 0.95 0.01
114_E 75_F 0.94 0.01
165_A 76_L 0.93 0.01
36_V 22_S 0.93 0.01
88_L 55_I 0.93 0.01
27_L 74_G 0.92 0.01
177_N 76_L 0.92 0.01
145_M 21_P 0.91 0.01
133_L 55_I 0.91 0.01
83_W 55_I 0.90 0.01
27_L 68_Q 0.89 0.01
37_T 56_G 0.87 0.01
136_F 55_I 0.87 0.01
20_S 34_G 0.86 0.01
11_L 75_F 0.85 0.01
91_G 62_M 0.84 0.00
77_P 53_R 0.83 0.00
11_L 43_E 0.83 0.00
145_M 96_G 0.83 0.00
155_W 93_T 0.83 0.00
139_A 76_L 0.82 0.00
66_V 37_I 0.82 0.00
110_I 59_S 0.82 0.00
57_A 44_G 0.82 0.00
137_E 22_S 0.82 0.00
155_W 53_R 0.81 0.00
163_E 55_I 0.81 0.00
32_Q 111_E 0.80 0.00
54_R 50_D 0.80 0.00
152_I 56_G 0.79 0.00
101_L 56_G 0.79 0.00
157_R 110_I 0.78 0.00
144_R 74_G 0.78 0.00
84_L 97_E 0.78 0.00
96_P 102_K 0.78 0.00
170_A 80_A 0.77 0.00
15_P 71_E 0.77 0.00
175_L 29_V 0.77 0.00
93_A 96_G 0.76 0.00
93_A 56_G 0.76 0.00
46_P 89_E 0.76 0.00
114_E 59_S 0.76 0.00
62_H 35_V 0.76 0.00
111_T 81_Y 0.75 0.00
102_A 32_R 0.75 0.00
52_I 81_Y 0.75 0.00
66_V 71_E 0.75 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.7523 seconds.