May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

ATPE - MOCA
UniProt: P0A6E6 - Q46810
Length: 331
Sequences: 213
Seq/Len: 0.66
I_Prob: 0.01

ATPE - ATP synthase epsilon chain
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPE
MOCA - Molybdenum cofactor cytidylyltransferase
Paralog alert: 0.71 [within 20: 0.01] - ratio of genomes with paralogs
Cluster includes: MOBA MOCA
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
98_A 151_T 1.58 0.01
66_S 105_L 1.44 0.00
111_G 179_P 1.39 0.00
58_G 179_P 1.29 0.00
99_K 54_G 1.29 0.00
135_T 97_L 1.19 0.00
69_I 105_L 1.18 0.00
116_A 26_W 1.18 0.00
99_K 50_T 1.14 0.00
59_H 184_T 1.12 0.00
43_L 66_N 1.11 0.00
128_Q 83_V 1.09 0.00
2_A 88_P 1.08 0.00
32_E 182_F 1.08 0.00
136_K 46_I 1.06 0.00
137_K 147_R 1.06 0.00
35_I 85_A 1.05 0.00
47_K 132_H 1.04 0.00
106_I 71_H 1.03 0.00
132_I 90_V 1.03 0.00
23_K 138_K 1.03 0.00
105_H 75_Y 1.03 0.00
65_L 112_K 1.02 0.00
94_R 56_E 1.02 0.00
121_E 162_H 1.02 0.00
64_Y 61_Y 1.01 0.00
96_M 132_H 1.01 0.00
61_E 110_F 1.00 0.00
61_E 158_L 1.00 0.00
65_L 178_T 1.00 0.00
40_A 176_I 0.99 0.00
62_F 15_S 0.99 0.00
79_V 73_P 0.98 0.00
120_A 122_I 0.98 0.00
131_V 15_S 0.98 0.00
95_A 129_I 0.98 0.00
131_V 48_L 0.97 0.00
40_A 159_M 0.97 0.00
26_V 32_L 0.97 0.00
18_S 173_I 0.96 0.00
78_T 176_I 0.96 0.00
106_I 57_L 0.96 0.00
79_V 7_I 0.95 0.00
37_P 132_H 0.95 0.00
7_L 31_I 0.94 0.00
36_Y 95_C 0.94 0.00
65_L 49_V 0.94 0.00
76_N 97_L 0.94 0.00
90_L 62_A 0.94 0.00
36_Y 114_W 0.94 0.00
104_E 50_T 0.93 0.00
114_D 13_L 0.92 0.00
26_V 57_L 0.92 0.00
114_D 15_S 0.92 0.00
41_P 144_A 0.91 0.00
51_I 185_A 0.91 0.00
79_V 68_T 0.91 0.00
117_Q 144_A 0.91 0.00
93_A 52_Y 0.91 0.00
12_A 85_A 0.91 0.00
77_V 110_F 0.91 0.00
62_F 56_E 0.91 0.00
133_E 128_G 0.90 0.00
96_M 157_L 0.90 0.00
131_V 54_G 0.90 0.00
133_E 105_L 0.90 0.00
81_A 23_M 0.90 0.00
37_P 43_C 0.90 0.00
45_A 97_L 0.89 0.00
89_D 6_C 0.89 0.00
4_T 53_R 0.89 0.00
93_A 35_S 0.89 0.00
107_S 110_F 0.89 0.00
46_I 135_L 0.88 0.00
132_I 26_W 0.88 0.00
64_Y 123_L 0.88 0.00
95_A 76_A 0.88 0.00
101_K 18_G 0.87 0.00
30_E 36_I 0.87 0.00
46_I 32_L 0.87 0.00
5_Y 165_V 0.87 0.00
113_V 84_K 0.87 0.00
28_G 31_I 0.87 0.00
136_K 102_M 0.87 0.00
83_T 176_I 0.87 0.00
75_G 25_P 0.87 0.00
111_G 93_E 0.86 0.00
4_T 8_I 0.86 0.00
11_S 99_H 0.86 0.00
22_E 25_P 0.86 0.00
126_I 44_S 0.86 0.00
32_E 117_R 0.85 0.00
134_L 31_I 0.85 0.00
61_E 185_A 0.85 0.00
27_T 171_E 0.85 0.00
4_T 86_A 0.84 0.00
6_H 130_P 0.84 0.00
43_L 141_L 0.84 0.00
103_E 46_I 0.84 0.00
65_L 176_I 0.84 0.00
87_G 54_G 0.84 0.00
2_A 86_A 0.83 0.00
37_P 121_A 0.83 0.00
117_Q 176_I 0.83 0.00
15_Q 133_P 0.82 0.00
101_K 83_V 0.82 0.00
70_L 178_T 0.82 0.00
92_E 6_C 0.82 0.00
1_M 110_F 0.81 0.00
107_S 179_P 0.81 0.00
45_A 52_Y 0.81 0.00
23_K 57_L 0.81 0.00
123_A 183_I 0.81 0.00
14_Q 7_I 0.80 0.00
136_K 121_A 0.80 0.00
72_V 165_V 0.80 0.00
90_L 163_Y 0.80 0.00
64_Y 24_L 0.80 0.00
41_P 76_A 0.80 0.00
107_S 164_S 0.80 0.00
103_E 182_F 0.80 0.00
75_G 41_Q 0.79 0.00
16_M 4_I 0.79 0.00
16_M 153_M 0.79 0.00
40_A 39_A 0.79 0.00
75_G 161_D 0.79 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

Page generated in 0.3481 seconds.