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OPENSEQ.org

ATPE - RMLA1
UniProt: P0A6E6 - P37744
Length: 432
Sequences: 266
Seq/Len: 0.68
I_Prob: 0.00

ATPE - ATP synthase epsilon chain
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs
Cluster includes: ATPE
RMLA1 - Glucose-1-phosphate thymidylyltransferase 1
Paralog alert: 0.90 [within 20: 0.20] - ratio of genomes with paralogs
Cluster includes: GALF GALU RMLA1 RMLA2
GREMLIN Results (Scaled_score > 1):

Legend: The darker and larger the blue dots, the higher strength in coevolution.

Residue pairs sorted by strength in coevolution signal:
i j Scaled Score I_Prob
111_G 230_H 1.55 0.00
23_K 181_N 1.33 0.00
37_P 49_I 1.28 0.00
61_E 119_L 1.25 0.00
99_K 56_S 1.19 0.00
107_S 105_C 1.19 0.00
35_I 157_A 1.18 0.00
134_L 259_F 1.15 0.00
106_I 82_V 1.11 0.00
58_G 230_H 1.11 0.00
32_E 180_D 1.11 0.00
131_V 61_T 1.09 0.00
7_L 36_M 1.07 0.00
26_V 159_S 1.07 0.00
35_I 52_I 1.06 0.00
35_I 95_I 1.05 0.00
46_I 224_W 1.05 0.00
133_E 193_S 1.04 0.00
14_Q 203_I 1.04 0.00
44_T 37_I 1.04 0.00
59_H 52_I 1.03 0.00
98_A 198_L 1.02 0.00
43_L 15_T 1.00 0.00
32_E 233_L 1.00 0.00
24_I 194_A 0.99 0.00
99_K 61_T 0.99 0.00
106_I 257_I 0.99 0.00
51_I 236_A 0.98 0.00
2_A 98_E 0.98 0.00
69_I 115_Y 0.98 0.00
65_L 58_P 0.98 0.00
58_G 81_K 0.97 0.00
78_T 227_T 0.97 0.00
32_E 179_Y 0.95 0.00
14_Q 7_I 0.95 0.00
131_V 15_T 0.95 0.00
134_L 222_Y 0.95 0.00
64_Y 216_A 0.94 0.00
75_G 41_L 0.93 0.00
79_V 79_Q 0.93 0.00
95_A 156_T 0.92 0.00
32_E 172_A 0.92 0.00
106_I 52_I 0.92 0.00
128_Q 198_L 0.92 0.00
90_L 216_A 0.91 0.00
130_R 140_V 0.91 0.00
56_Q 255_E 0.91 0.00
47_K 176_L 0.91 0.00
62_F 15_T 0.91 0.00
42_L 165_L 0.91 0.00
133_E 117_H 0.91 0.00
9_V 142_D 0.89 0.00
65_L 229_T 0.89 0.00
5_Y 250_K 0.88 0.00
85_I 259_F 0.88 0.00
35_I 133_A 0.88 0.00
90_L 126_A 0.88 0.00
76_N 31_I 0.88 0.00
11_S 177_Y 0.88 0.00
21_V 30_P 0.87 0.00
28_G 207_Y 0.87 0.00
79_V 7_I 0.86 0.00
64_Y 68_L 0.86 0.00
12_A 95_I 0.86 0.00
5_Y 155_G 0.86 0.00
134_L 31_I 0.86 0.00
95_A 86_P 0.86 0.00
32_E 191_K 0.86 0.00
46_I 15_T 0.85 0.00
95_A 174_T 0.85 0.00
4_T 8_I 0.85 0.00
45_A 107_L 0.85 0.00
9_V 140_V 0.84 0.00
94_R 18_Y 0.84 0.00
40_A 206_I 0.84 0.00
23_K 34_K 0.83 0.00
85_I 239_F 0.83 0.00
116_A 31_I 0.83 0.00
121_E 215_V 0.83 0.00
130_R 127_V 0.83 0.00
50_M 142_D 0.83 0.00
104_E 56_S 0.83 0.00
135_T 49_I 0.83 0.00
26_V 64_F 0.83 0.00
53_I 216_A 0.82 0.00
23_K 257_I 0.82 0.00
85_I 42_S 0.81 0.00
66_S 115_Y 0.81 0.00
36_Y 51_D 0.81 0.00
136_K 112_N 0.81 0.00
65_L 62_P 0.81 0.00
69_I 243_I 0.81 0.00
88_Q 62_P 0.81 0.00
136_K 133_A 0.80 0.00
94_R 68_L 0.80 0.00
35_I 152_D 0.80 0.00
108_S 154_N 0.80 0.00
109_S 204_N 0.80 0.00
90_L 154_N 0.80 0.00
11_S 260_R 0.80 0.00
16_M 65_Q 0.80 0.00
9_V 160_L 0.79 0.00
35_I 50_R 0.79 0.00
134_L 36_M 0.79 0.00
136_K 259_F 0.79 0.00
33_L 227_T 0.79 0.00
131_V 54_I 0.79 0.00
21_V 152_D 0.79 0.00
92_E 95_I 0.79 0.00
107_S 230_H 0.79 0.00
107_S 245_E 0.79 0.00
48_P 177_Y 0.79 0.00
21_V 18_Y 0.78 0.00
Legend: The i (protein A) and j (protein B) are positions as given in the UniProt sequences. The value of the raw score is the function of the learning procedure, L2 normalization and APC (entropic) correction.

Scaled Score = raw_score/average(raw_scores)
I_Prob = P(contact | scaled_score, seq/len, top_inter_score)

Text file of predictions
(includes both intra and inter preds)

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