| UniProt: | P76502 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG14126 | ||
| Length: | 161 (156) | ||
| Sequences: | 1194 | ||
| Seq/Len: | 7.65 |
| SIXA
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 109_L | 113_G | 3.237 | 1.00 | |
| 6_M | 104_L | 3.154 | 1.00 | |
| 136_V | 144_G | 2.811 | 1.00 | |
| 12_A | 22_P | 2.766 | 1.00 | |
| 22_P | 54_L | 2.616 | 1.00 | |
| 57_E | 75_V | 2.488 | 1.00 | |
| 19_S | 52_P | 2.464 | 1.00 | |
| 5_I | 116_V | 2.445 | 1.00 | |
| 128_F | 134_A | 2.332 | 1.00 | |
| 95_L | 103_V | 2.303 | 1.00 | |
| 100_V | 103_V | 2.114 | 1.00 | |
| 5_I | 112_V | 2.041 | 1.00 | |
| 17_S | 20_V | 1.983 | 1.00 | |
| 50_V | 60_L | 1.961 | 1.00 | |
| 48_V | 60_L | 1.904 | 1.00 | |
| 4_F | 102_S | 1.881 | 1.00 | |
| 6_M | 133_I | 1.857 | 1.00 | |
| 53_F | 56_A | 1.851 | 1.00 | |
| 9_G | 31_S | 1.763 | 1.00 | |
| 50_V | 75_V | 1.722 | 1.00 | |
| 107_S | 112_V | 1.702 | 1.00 | |
| 37_W | 41_Q | 1.668 | 1.00 | |
| 138_L | 144_G | 1.64 | 1.00 | |
| 6_M | 63_V | 1.613 | 1.00 | |
| 4_F | 133_I | 1.577 | 1.00 | |
| 134_A | 146_F | 1.569 | 1.00 | |
| 107_S | 111_L | 1.555 | 1.00 | |
| 31_S | 35_A | 1.538 | 1.00 | |
| 53_F | 80_T | 1.521 | 1.00 | |
| 50_V | 57_E | 1.499 | 0.99 | |
| 45_I | 104_L | 1.484 | 0.99 | |
| 10_D | 130_T | 1.471 | 0.99 | |
| 35_A | 63_V | 1.457 | 0.99 | |
| 10_D | 24_T | 1.456 | 0.99 | |
| 54_L | 58_Q | 1.437 | 0.99 | |
| 116_V | 134_A | 1.427 | 0.99 | |
| 88_V | 111_L | 1.415 | 0.99 | |
| 11_A | 24_T | 1.355 | 0.99 | |
| 25_T | 28_C | 1.354 | 0.99 | |
| 58_Q | 61_E | 1.345 | 0.99 | |
| 132_A | 149_Q | 1.319 | 0.98 | |
| 38_L | 133_I | 1.311 | 0.98 | |
| 129_T | 149_Q | 1.309 | 0.98 | |
| 19_S | 53_F | 1.26 | 0.98 | |
| 2_Q | 137_T | 1.256 | 0.97 | |
| 28_C | 62_E | 1.245 | 0.97 | |
| 135_S | 148_W | 1.243 | 0.97 | |
| 137_T | 145_T | 1.229 | 0.97 | |
| 9_G | 111_L | 1.222 | 0.97 | |
| 83_G | 111_L | 1.193 | 0.96 | |
| 128_F | 132_A | 1.182 | 0.96 | |
| 4_F | 135_S | 1.179 | 0.96 | |
| 11_A | 153_C | 1.178 | 0.96 | |
| 78_E | 94_A | 1.173 | 0.96 | |
| 47_R | 74_E | 1.159 | 0.95 | |
| 79_L | 82_C | 1.126 | 0.94 | |
| 49_L | 103_V | 1.111 | 0.94 | |
| 63_V | 106_I | 1.109 | 0.94 | |
| 20_V | 54_L | 1.108 | 0.94 | |
| 53_F | 111_L | 1.106 | 0.94 | |
| 31_S | 131_S | 1.103 | 0.94 | |
| 12_A | 24_T | 1.091 | 0.93 | |
| 82_C | 111_L | 1.08 | 0.93 | |
| 10_D | 26_N | 1.077 | 0.92 | |
| 22_P | 58_Q | 1.069 | 0.92 | |
| 85_V | 118_E | 1.055 | 0.91 | |
| 11_A | 127_M | 1.052 | 0.91 | |
| 56_A | 130_T | 1.042 | 0.91 | |
| 10_D | 30_E | 1.015 | 0.89 | |
| 78_E | 91_Y | 1.014 | 0.89 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1ujcA | 1 | 1 | 100 | 0.284 | Contact Map | 0.767 |
| 3f2iA | 6 | 0.9938 | 100 | 0.319 | Contact Map | 0.766 |
| 2rflA | 8 | 0.9503 | 100 | 0.343 | Contact Map | 0.866 |
| 4hbzA | 1 | 0.913 | 100 | 0.356 | Contact Map | 0.714 |
| 3fjyA | 2 | 0.9752 | 99.9 | 0.394 | Contact Map | 0.568 |
| 1fztA | 1 | 0.9441 | 99.9 | 0.472 | Contact Map | 0.563 |
| 2a6pA | 2 | 0.9938 | 99.9 | 0.477 | Contact Map | 0.574 |
| 4ij5A | 2 | 0.9689 | 99.9 | 0.479 | Contact Map | 0.763 |
| 3eozA | 2 | 0.9752 | 99.9 | 0.48 | Contact Map | 0.752 |
| 1h2eA | 1 | 0.9689 | 99.9 | 0.48 | Contact Map | 0.601 |
Sequence Conservation (Image Generated using WebLogo v3)