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OPENSEQ.org

YEDZ - Sulfoxide reductase heme-binding subunit YedZ
UniProt: P76343 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG14048
Length: 211 (197)
Sequences: 422
Seq/Len: 2.14

YEDZ
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
61_I 73_L 2.593 1.00
136_T 139_M 2.511 1.00
138_A 142_K 2.488 1.00
97_L 102_V 2.365 1.00
127_I 157_V 2.361 1.00
61_I 80_L 2.337 1.00
85_F 132_A 2.291 1.00
51_A 88_A 2.27 1.00
16_H 79_L 2.145 1.00
139_M 143_L 2.115 0.99
56_L 183_A 2.021 0.99
89_T 125_W 1.964 0.99
49_R 165_Y 1.895 0.99
38_D 41_K 1.879 0.98
165_Y 175_Q 1.867 0.98
19_G 54_F 1.866 0.98
146_H 149_Q 1.807 0.98
127_I 130_A 1.802 0.98
92_L 125_W 1.721 0.97
145_K 149_Q 1.677 0.96
178_I 182_L 1.664 0.96
133_F 139_M 1.658 0.96
92_L 122_I 1.613 0.95
58_T 84_C 1.569 0.94
170_K 176_P 1.561 0.94
57_A 158_A 1.551 0.94
120_L 163_I 1.546 0.93
40_V 99_E 1.535 0.93
58_T 157_V 1.497 0.92
120_L 167_W 1.488 0.92
16_H 83_W 1.477 0.91
40_V 101_G 1.465 0.91
63_P 131_L 1.44 0.90
82_L 86_A 1.428 0.89
175_Q 179_Y 1.412 0.89
158_A 183_A 1.408 0.88
131_L 150_L 1.405 0.88
128_L 157_V 1.381 0.87
88_A 161_A 1.38 0.87
25_W 29_A 1.379 0.87
106_A 181_G 1.354 0.86
115_R 119_T 1.349 0.85
88_A 128_L 1.329 0.84
19_G 83_W 1.326 0.84
12_K 79_L 1.312 0.83
108_L 112_L 1.309 0.83
114_T 118_L 1.308 0.83
50_T 53_K 1.306 0.83
79_L 83_W 1.302 0.82
139_M 142_K 1.298 0.82
143_L 146_H 1.291 0.82
50_T 79_L 1.267 0.80
100_L 108_L 1.251 0.79
53_K 179_Y 1.247 0.79
111_E 117_Y 1.245 0.78
22_P 87_W 1.243 0.78
129_L 157_V 1.223 0.77
136_T 142_K 1.219 0.76
100_L 111_E 1.216 0.76
100_L 107_L 1.215 0.76
49_R 53_K 1.164 0.71
153_F 156_L 1.158 0.71
45_H 125_W 1.156 0.71
28_W 32_H 1.151 0.70
116_P 167_W 1.148 0.70
162_P 180_A 1.143 0.70
68_A 71_P 1.132 0.68
24_L 76_T 1.116 0.67
51_A 161_A 1.101 0.65
11_L 17_L 1.1 0.65
12_K 16_H 1.095 0.65
43_I 94_S 1.094 0.65
99_E 170_K 1.074 0.62
116_P 179_Y 1.074 0.62
57_A 98_L 1.073 0.62
59_L 63_P 1.065 0.62
47_T 122_I 1.062 0.61
19_G 80_L 1.057 0.61
44_Q 117_Y 1.055 0.60
66_R 133_F 1.043 0.59
6_K 9_T 1.041 0.59
63_P 190_R 1.034 0.58
17_L 74_I 1.02 0.57
57_A 80_L 1.008 0.55
28_W 34_G 1.003 0.55
29_A 34_G 1.002 0.55
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
4i0uA100.322350.97Contact Map0.531
4ev6A50.32233.90.971Contact Map0.476
1pp9C20.3272.50.974Contact Map0.16
3arcI20.17542.20.975Contact Map0.348
3lbwA40.10920.975Contact Map0.594
3ogkQ70.10431.70.976Contact Map
1hgvA10.2181.70.976Contact Map0.341
3cx5C20.35071.40.978Contact Map0.145
3ne5A10.33651.30.978Contact Map0.384
4jkvA20.72041.20.978Contact Map0.143

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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