| UniProt: | P75684 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13555 | ||
| Length: | 136 (123) | ||
| Sequences: | 10076 | ||
| Seq/Len: | 81.92 |
| YAGP
Paralog alert: 0.90 [within 20: 0.34] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 70_A | 77_T | 4.381 | 1.00 | |
| 26_K | 57_Q | 3.846 | 1.00 | |
| 71_L | 87_Y | 3.816 | 1.00 | |
| 95_S | 98_D | 3.603 | 1.00 | |
| 67_L | 87_Y | 3.579 | 1.00 | |
| 15_E | 94_V | 3.358 | 1.00 | |
| 87_Y | 92_K | 2.881 | 1.00 | |
| 13_R | 26_K | 2.85 | 1.00 | |
| 109_L | 125_I | 2.622 | 1.00 | |
| 17_F | 21_G | 2.41 | 1.00 | |
| 85_R | 89_E | 2.377 | 1.00 | |
| 28_I | 66_M | 2.321 | 1.00 | |
| 19_A | 100_F | 2.292 | 1.00 | |
| 67_L | 71_L | 2.282 | 1.00 | |
| 18_L | 21_G | 2.252 | 1.00 | |
| 27_C | 41_W | 2.067 | 1.00 | |
| 71_L | 92_K | 2.066 | 1.00 | |
| 25_H | 76_I | 1.983 | 1.00 | |
| 10_A | 15_E | 1.864 | 1.00 | |
| 58_I | 69_L | 1.824 | 1.00 | |
| 60_T | 66_M | 1.813 | 1.00 | |
| 86_P | 90_S | 1.786 | 1.00 | |
| 87_Y | 90_S | 1.73 | 1.00 | |
| 79_A | 84_F | 1.66 | 1.00 | |
| 81_Q | 85_R | 1.653 | 1.00 | |
| 126_D | 129_K | 1.62 | 1.00 | |
| 27_C | 54_I | 1.61 | 1.00 | |
| 68_R | 72_A | 1.472 | 1.00 | |
| 124_L | 128_V | 1.456 | 1.00 | |
| 127_Y | 131_W | 1.452 | 1.00 | |
| 76_I | 96_L | 1.434 | 1.00 | |
| 122_R | 126_D | 1.379 | 0.99 | |
| 69_L | 74_G | 1.354 | 0.99 | |
| 21_G | 24_T | 1.303 | 0.99 | |
| 40_R | 51_D | 1.291 | 0.99 | |
| 117_I | 122_R | 1.276 | 0.99 | |
| 70_A | 93_L | 1.249 | 0.99 | |
| 10_A | 96_L | 1.222 | 0.98 | |
| 84_F | 87_Y | 1.21 | 0.98 | |
| 29_G | 56_P | 1.173 | 0.98 | |
| 123_A | 127_Y | 1.173 | 0.98 | |
| 60_T | 65_L | 1.17 | 0.97 | |
| 84_F | 88_I | 1.152 | 0.97 | |
| 28_I | 75_G | 1.138 | 0.97 | |
| 95_S | 101_L | 1.138 | 0.97 | |
| 63_L | 80_T | 1.12 | 0.96 | |
| 111_F | 125_I | 1.116 | 0.96 | |
| 86_P | 89_E | 1.11 | 0.96 | |
| 80_T | 83_T | 1.108 | 0.96 | |
| 117_I | 121_L | 1.094 | 0.96 | |
| 88_I | 95_S | 1.092 | 0.96 | |
| 26_K | 56_P | 1.091 | 0.96 | |
| 13_R | 25_H | 1.084 | 0.96 | |
| 119_P | 123_A | 1.077 | 0.95 | |
| 66_M | 77_T | 1.07 | 0.95 | |
| 45_E | 48_R | 1.039 | 0.94 | |
| 123_A | 126_D | 1.031 | 0.94 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3hhgA | 8 | 0.9779 | 99.3 | 0.395 | Contact Map | 0.875 |
| 3mz1A | 4 | 0.9926 | 99.3 | 0.406 | Contact Map | 0.654 |
| 3szpA | 2 | 0.9485 | 99.2 | 0.421 | Contact Map | 0.873 |
| 1al3A | 1 | 0.9706 | 99.1 | 0.449 | Contact Map | 0.632 |
| 3fzvA | 4 | 0.9632 | 99.1 | 0.457 | Contact Map | 0.627 |
| 3hhfB | 2 | 0.9779 | 99.1 | 0.46 | Contact Map | 0.826 |
| 3kosA | 1 | 0.9706 | 99.1 | 0.461 | Contact Map | 0.731 |
| 2hxrA | 2 | 0.9559 | 99.1 | 0.462 | Contact Map | 0.726 |
| 4ab5A | 2 | 0.9559 | 99.1 | 0.463 | Contact Map | 0.73 |
| 3fd3A | 1 | 0.9412 | 99 | 0.465 | Contact Map | 0.65 |
Sequence Conservation (Image Generated using WebLogo v3)