| UniProt: | P69488 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12177 | ||
| Length: | 112 (103) | ||
| Sequences: | 829 | ||
| Seq/Len: | 8.05 |
| CUTA
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 34_E | 79_C | 2.94 | 1.00 | |
| 23_T | 85_P | 2.782 | 1.00 | |
| 73_Q | 77_L | 2.746 | 1.00 | |
| 99_G | 104_L | 2.698 | 1.00 | |
| 32_L | 49_L | 2.486 | 1.00 | |
| 25_Q | 58_Q | 2.172 | 1.00 | |
| 40_A | 66_L | 2.154 | 1.00 | |
| 37_A | 66_L | 2.094 | 1.00 | |
| 19_P | 85_P | 2.07 | 1.00 | |
| 79_C | 83_H | 1.949 | 1.00 | |
| 29_A | 58_Q | 1.939 | 1.00 | |
| 16_C | 80_L | 1.796 | 1.00 | |
| 53_E | 87_Q | 1.73 | 1.00 | |
| 11_S | 107_L | 1.683 | 1.00 | |
| 72_H | 75_A | 1.674 | 1.00 | |
| 63_Q | 90_E | 1.602 | 1.00 | |
| 14_V | 76_L | 1.535 | 1.00 | |
| 30_K | 79_C | 1.522 | 1.00 | |
| 16_C | 66_L | 1.503 | 1.00 | |
| 81_K | 102_D | 1.491 | 0.99 | |
| 19_P | 23_T | 1.423 | 0.99 | |
| 41_T | 63_Q | 1.422 | 0.99 | |
| 20_D | 23_T | 1.395 | 0.99 | |
| 27_L | 83_H | 1.389 | 0.99 | |
| 21_E | 25_Q | 1.385 | 0.99 | |
| 69_T | 72_H | 1.382 | 0.99 | |
| 50_Y | 59_E | 1.364 | 0.99 | |
| 25_Q | 47_T | 1.345 | 0.99 | |
| 31_V | 66_L | 1.34 | 0.99 | |
| 43_I | 65_I | 1.336 | 0.99 | |
| 18_A | 64_M | 1.327 | 0.99 | |
| 73_Q | 93_V | 1.307 | 0.98 | |
| 15_L | 90_E | 1.3 | 0.98 | |
| 31_V | 76_L | 1.29 | 0.98 | |
| 96_V | 99_G | 1.28 | 0.98 | |
| 88_T | 100_D | 1.254 | 0.98 | |
| 72_H | 111_L | 1.238 | 0.97 | |
| 12_V | 73_Q | 1.214 | 0.97 | |
| 90_E | 103_Y | 1.208 | 0.97 | |
| 40_A | 64_M | 1.203 | 0.97 | |
| 92_L | 96_V | 1.19 | 0.97 | |
| 43_I | 63_Q | 1.182 | 0.96 | |
| 42_L | 62_V | 1.174 | 0.96 | |
| 47_T | 58_Q | 1.162 | 0.96 | |
| 39_C | 67_K | 1.141 | 0.95 | |
| 28_A | 40_A | 1.126 | 0.95 | |
| 35_K | 51_Y | 1.125 | 0.95 | |
| 15_L | 63_Q | 1.11 | 0.94 | |
| 105_S | 109_A | 1.106 | 0.94 | |
| 77_L | 81_K | 1.106 | 0.94 | |
| 41_T | 46_A | 1.101 | 0.94 | |
| 15_L | 41_T | 1.091 | 0.94 | |
| 37_A | 40_A | 1.088 | 0.94 | |
| 46_A | 63_Q | 1.075 | 0.93 | |
| 53_E | 57_E | 1.072 | 0.93 | |
| 79_C | 82_S | 1.059 | 0.92 | |
| 88_T | 102_D | 1.055 | 0.92 | |
| 30_K | 34_E | 1.053 | 0.92 | |
| 35_K | 110_S | 1.047 | 0.92 | |
| 28_A | 42_L | 1.023 | 0.91 | |
| 42_L | 49_L | 1.014 | 0.90 | |
| 18_A | 62_V | 1.013 | 0.90 | |
| 51_Y | 110_S | 1.01 | 0.90 | |
| 11_S | 96_V | 1.001 | 0.89 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4e98A | 3 | 1 | 100 | 0.064 | Contact Map | 0.895 |
| 2zfhA | 6 | 1 | 100 | 0.071 | Contact Map | 0.934 |
| 3gsdA | 12 | 1 | 100 | 0.072 | Contact Map | 0.839 |
| 4iyqA | 3 | 1 | 100 | 0.074 | Contact Map | 0.821 |
| 1naqA | 6 | 1 | 100 | 0.079 | Contact Map | 0.745 |
| 1oscA | 6 | 1 | 100 | 0.086 | Contact Map | 0.931 |
| 1kr4A | 1 | 0.9911 | 100 | 0.088 | Contact Map | 0.61 |
| 2zomA | 3 | 0.9911 | 100 | 0.091 | Contact Map | 0.818 |
| 2nuhA | 1 | 0.9464 | 100 | 0.103 | Contact Map | 0.734 |
| 1nzaA | 1 | 0.9196 | 100 | 0.105 | Contact Map | 0.682 |
Sequence Conservation (Image Generated using WebLogo v3)