| UniProt: | P69348 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG14356 | ||
| Length: | 84 (84) | ||
| Sequences: | 562 | ||
| Seq/Len: | 6.69 |
| YOEB
Paralog alert: 0.10 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 61_T | 64_H | 3.54 | 1.00 | |
| 13_Y | 28_N | 2.59 | 1.00 | |
| 33_D | 42_K | 2.414 | 1.00 | |
| 47_P | 56_W | 2.272 | 1.00 | |
| 23_I | 61_T | 2.241 | 1.00 | |
| 55_F | 69_A | 2.165 | 1.00 | |
| 33_D | 37_T | 2.067 | 1.00 | |
| 55_F | 78_A | 1.95 | 1.00 | |
| 37_T | 40_E | 1.816 | 1.00 | |
| 17_Q | 28_N | 1.79 | 1.00 | |
| 23_I | 64_H | 1.789 | 1.00 | |
| 39_F | 56_W | 1.75 | 1.00 | |
| 15_Y | 81_R | 1.652 | 1.00 | |
| 3_L | 35_R | 1.632 | 1.00 | |
| 31_I | 77_I | 1.567 | 0.99 | |
| 66_L | 80_C | 1.564 | 0.99 | |
| 39_F | 70_V | 1.536 | 0.99 | |
| 24_V | 28_N | 1.419 | 0.99 | |
| 39_F | 47_P | 1.386 | 0.98 | |
| 30_L | 66_L | 1.374 | 0.98 | |
| 10_W | 13_Y | 1.351 | 0.98 | |
| 15_Y | 19_T | 1.34 | 0.98 | |
| 13_Y | 17_Q | 1.337 | 0.98 | |
| 34_T | 75_L | 1.333 | 0.98 | |
| 14_L | 17_Q | 1.303 | 0.97 | |
| 41_G | 58_R | 1.289 | 0.97 | |
| 69_A | 76_L | 1.282 | 0.97 | |
| 58_R | 68_Y | 1.258 | 0.97 | |
| 71_T | 76_L | 1.239 | 0.96 | |
| 2_K | 73_D | 1.222 | 0.96 | |
| 6_S | 78_A | 1.216 | 0.96 | |
| 17_Q | 24_V | 1.196 | 0.95 | |
| 7_E | 35_R | 1.183 | 0.95 | |
| 60_I | 66_L | 1.173 | 0.95 | |
| 41_G | 68_Y | 1.15 | 0.94 | |
| 27_I | 60_I | 1.149 | 0.94 | |
| 10_W | 36_R | 1.129 | 0.93 | |
| 12_D | 15_Y | 1.122 | 0.93 | |
| 4_I | 74_S | 1.119 | 0.93 | |
| 44_K | 62_E | 1.096 | 0.92 | |
| 16_W | 23_I | 1.033 | 0.88 | |
| 21_K | 26_K | 1.029 | 0.88 | |
| 5_W | 80_C | 1.014 | 0.87 | |
| 50_H | 76_L | 1.005 | 0.86 | |
| 16_W | 27_I | 1.002 | 0.86 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3oeiC | 8 | 1 | 99.8 | 0.465 | Contact Map | 0.769 |
| 2a6sA | 4 | 1 | 99.7 | 0.505 | Contact Map | 0.872 |
| 1z8mA | 1 | 0.9881 | 99.5 | 0.572 | Contact Map | 0.355 |
| 2otrA | 1 | 0.9881 | 99.4 | 0.601 | Contact Map | 0.372 |
| 3bpqB | 2 | 0.9405 | 98.9 | 0.672 | Contact Map | 0.451 |
| 3g5oB | 2 | 0.9167 | 98.9 | 0.681 | Contact Map | 0.573 |
| 1wmiA | 2 | 0.9524 | 98.8 | 0.692 | Contact Map | 0.593 |
| 4fxiA | 3 | 0.9167 | 98.7 | 0.695 | Contact Map | 0.526 |
| 2kheA | 1 | 0.9167 | 98.4 | 0.726 | Contact Map | 0.529 |
| 3kxeA | 2 | 0.9286 | 96.7 | 0.804 | Contact Map | 0.648 |
Sequence Conservation (Image Generated using WebLogo v3)