| UniProt: | P69346 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12844 | ||
| Length: | 83 (83) | ||
| Sequences: | 491 | ||
| Seq/Len: | 5.92 |
| YEFM
Paralog alert: 0.08 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 24_H | 44_E | 2.895 | 1.00 | |
| 42_L | 46_N | 2.336 | 1.00 | |
| 36_A | 42_L | 2.269 | 1.00 | |
| 7_S | 10_R | 2.222 | 1.00 | |
| 9_A | 16_T | 2.196 | 1.00 | |
| 17_M | 37_C | 2.14 | 1.00 | |
| 29_I | 39_L | 1.913 | 1.00 | |
| 48_L | 52_A | 1.761 | 1.00 | |
| 45_Y | 48_L | 1.724 | 1.00 | |
| 9_A | 13_L | 1.695 | 1.00 | |
| 9_A | 29_I | 1.695 | 1.00 | |
| 52_A | 56_R | 1.597 | 0.99 | |
| 17_M | 39_L | 1.517 | 0.99 | |
| 10_R | 14_S | 1.486 | 0.99 | |
| 19_K | 23_D | 1.433 | 0.98 | |
| 40_M | 45_Y | 1.404 | 0.98 | |
| 61_A | 64_L | 1.375 | 0.98 | |
| 54_L | 60_N | 1.373 | 0.98 | |
| 79_K | 82_I | 1.362 | 0.98 | |
| 18_M | 31_R | 1.357 | 0.98 | |
| 69_D | 73_S | 1.345 | 0.97 | |
| 12_N | 15_A | 1.308 | 0.97 | |
| 59_A | 63_R | 1.245 | 0.96 | |
| 60_N | 64_L | 1.232 | 0.95 | |
| 10_R | 32_Q | 1.225 | 0.95 | |
| 66_D | 70_S | 1.206 | 0.94 | |
| 28_L | 42_L | 1.205 | 0.94 | |
| 38_V | 41_S | 1.205 | 0.94 | |
| 22_E | 35_E | 1.203 | 0.94 | |
| 71_L | 76_G | 1.195 | 0.94 | |
| 26_P | 45_Y | 1.188 | 0.94 | |
| 2_R | 47_S | 1.168 | 0.93 | |
| 2_R | 42_L | 1.159 | 0.93 | |
| 29_I | 37_C | 1.157 | 0.93 | |
| 4_I | 9_A | 1.156 | 0.93 | |
| 78_E | 83_E | 1.145 | 0.92 | |
| 55_L | 61_A | 1.132 | 0.92 | |
| 38_V | 45_Y | 1.125 | 0.91 | |
| 47_S | 51_T | 1.118 | 0.91 | |
| 60_N | 63_R | 1.088 | 0.89 | |
| 24_H | 43_E | 1.074 | 0.88 | |
| 57_S | 60_N | 1.043 | 0.86 | |
| 54_L | 61_A | 1.021 | 0.85 | |
| 3_T | 28_L | 1.014 | 0.84 | |
| 4_I | 8_E | 1.006 | 0.84 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2a6qA | 4 | 1 | 99.8 | 0.297 | Contact Map | 0.784 |
| 3d55A | 4 | 0.9759 | 99.8 | 0.304 | Contact Map | 0.835 |
| 3g5oA | 2 | 1 | 99.7 | 0.359 | Contact Map | 0.725 |
| 2odkA | 4 | 0.9277 | 99.5 | 0.455 | Contact Map | 0.749 |
| 3hryA | 3 | 0.8675 | 99.2 | 0.548 | Contact Map | 0.815 |
| 3hs2A | 8 | 0.6988 | 99 | 0.57 | Contact Map | 0.748 |
| 3k6qA | 4 | 0.9759 | 99 | 0.582 | Contact Map | 0.695 |
| 3dboA | 1 | 0.9398 | 98.8 | 0.603 | Contact Map | 0.451 |
| 4m7cA | 2 | 0.4337 | 9 | 0.911 | Contact Map | 0.381 |
| 3bpqA | 2 | 0.5663 | 8.3 | 0.912 | Contact Map | 0.893 |
Sequence Conservation (Image Generated using WebLogo v3)