| UniProt: | P68679 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10920 | ||
| Length: | 71 (66) | ||
| Sequences: | 525 | ||
| Seq/Len: | 7.95 |
| RS21
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 39_E | 47_R | 3.117 | 1.00 | |
| 31_E | 35_R | 2.699 | 1.00 | |
| 61_A | 64_N | 1.571 | 1.00 | |
| 6_V | 15_A | 1.563 | 1.00 | |
| 20_K | 29_L | 1.461 | 0.99 | |
| 29_L | 32_V | 1.4 | 0.99 | |
| 45_R | 49_K | 1.394 | 0.99 | |
| 22_S | 25_K | 1.377 | 0.99 | |
| 59_K | 62_R | 1.358 | 0.99 | |
| 46_K | 51_S | 1.345 | 0.99 | |
| 16_L | 22_S | 1.29 | 0.98 | |
| 31_E | 34_R | 1.287 | 0.98 | |
| 12_F | 46_K | 1.28 | 0.98 | |
| 61_A | 65_A | 1.278 | 0.98 | |
| 23_C | 28_V | 1.257 | 0.98 | |
| 17_R | 55_R | 1.188 | 0.96 | |
| 26_A | 33_R | 1.181 | 0.96 | |
| 15_A | 52_A | 1.179 | 0.96 | |
| 14_V | 17_R | 1.174 | 0.96 | |
| 47_R | 50_A | 1.153 | 0.96 | |
| 8_E | 20_K | 1.147 | 0.95 | |
| 50_A | 55_R | 1.143 | 0.95 | |
| 33_R | 36_E | 1.122 | 0.95 | |
| 1_M | 15_A | 1.112 | 0.94 | |
| 52_A | 55_R | 1.109 | 0.94 | |
| 2_P | 54_K | 1.099 | 0.94 | |
| 50_A | 53_V | 1.093 | 0.94 | |
| 34_R | 48_A | 1.068 | 0.93 | |
| 26_A | 30_A | 1.045 | 0.91 | |
| 14_V | 24_E | 1.041 | 0.91 | |
| 39_E | 44_E | 1.02 | 0.90 | |
| 31_E | 43_T | 1.004 | 0.89 | |
| 21_R | 41_P | 1.003 | 0.89 | |
| 27_G | 41_P | 1.002 | 0.89 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kiyU | 1 | 1 | 99.8 | 0.113 | Contact Map | 0.064 |
| 3bbnU | 1 | 1 | 99.8 | 0.168 | Contact Map | 0.1 |
| 2qpvA | 2 | 0.3662 | 7.1 | 0.895 | Contact Map | 0.254 |
| 3s5mA | 1 | 0.4085 | 6.8 | 0.896 | Contact Map | 0.114 |
| 1w3iA | 4 | 0.4366 | 5.1 | 0.901 | Contact Map | 0.504 |
| 1ob8A | 2 | 0.4225 | 4.1 | 0.906 | Contact Map | 0.235 |
| 3v4gA | 1 | 0.3803 | 4.1 | 0.906 | Contact Map | 0.318 |
| 2ghaA | 2 | 0.493 | 4 | 0.906 | Contact Map | 0.313 |
| 2z8uA | 4 | 0.4085 | 3.7 | 0.908 | Contact Map | 0.468 |
| 3k5iA | 4 | 0.4366 | 3.5 | 0.909 | Contact Map | 0.25 |
Sequence Conservation (Image Generated using WebLogo v3)