| UniProt: | P68206 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11928 | ||
| Length: | 69 (65) | ||
| Sequences: | 365 | ||
| Seq/Len: | 5.62 |
| YJBJ
Paralog alert: 0.06 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 19_E | 38_Q | 3.396 | 1.00 | |
| 12_Q | 45_E | 3.069 | 1.00 | |
| 5_E | 52_D | 2.659 | 1.00 | |
| 49_Y | 57_E | 2.366 | 1.00 | |
| 18_K | 26_D | 2.005 | 1.00 | |
| 3_K | 6_A | 1.797 | 1.00 | |
| 20_Q | 64_R | 1.688 | 1.00 | |
| 4_D | 51_K | 1.684 | 1.00 | |
| 49_Y | 53_Q | 1.655 | 1.00 | |
| 40_V | 55_E | 1.641 | 0.99 | |
| 16_K | 38_Q | 1.635 | 0.99 | |
| 31_I | 42_K | 1.62 | 0.99 | |
| 28_D | 46_R | 1.518 | 0.99 | |
| 56_K | 60_D | 1.506 | 0.99 | |
| 18_K | 37_D | 1.503 | 0.99 | |
| 59_V | 62_E | 1.491 | 0.99 | |
| 18_K | 30_T | 1.461 | 0.99 | |
| 2_N | 52_D | 1.375 | 0.98 | |
| 8_G | 15_G | 1.315 | 0.97 | |
| 15_G | 41_G | 1.306 | 0.96 | |
| 23_K | 31_I | 1.259 | 0.95 | |
| 41_G | 44_Q | 1.235 | 0.95 | |
| 18_K | 33_E | 1.151 | 0.92 | |
| 60_D | 64_R | 1.128 | 0.91 | |
| 24_L | 29_M | 1.128 | 0.91 | |
| 3_K | 7_G | 1.108 | 0.90 | |
| 30_T | 33_E | 1.094 | 0.89 | |
| 11_K | 37_D | 1.088 | 0.88 | |
| 2_N | 55_E | 1.087 | 0.88 | |
| 5_E | 9_N | 1.058 | 0.86 | |
| 53_Q | 56_K | 1.041 | 0.85 | |
| 3_K | 59_V | 1.041 | 0.85 | |
| 10_W | 21_W | 1.025 | 0.84 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1ywwA | 1 | 0.942 | 99.7 | 0.219 | Contact Map | 0.248 |
| 1rykA | 1 | 1 | 99.7 | 0.22 | Contact Map | 0.339 |
| 3rhiA | 4 | 0.5362 | 5 | 0.901 | Contact Map | 1 |
| 3g2bA | 1 | 0.8841 | 4.8 | 0.901 | Contact Map | 0.276 |
| 3c4iA | 2 | 0.5217 | 4.6 | 0.903 | Contact Map | 0.754 |
| 2o97B | 1 | 0.5217 | 4.5 | 0.903 | Contact Map | 0.679 |
| 1exeA | 2 | 0.5217 | 4.5 | 0.903 | Contact Map | 0.676 |
| 3j4aA | 12 | 0.4058 | 4.4 | 0.904 | Contact Map | 0.052 |
| 1mulA | 1 | 0.5217 | 4.4 | 0.904 | Contact Map | 0.708 |
| 1p71A | 2 | 0.5217 | 4.4 | 0.904 | Contact Map | 0.764 |
Sequence Conservation (Image Generated using WebLogo v3)