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YGGT - Uncharacterized protein YggT
UniProt: P64564 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG12980
Length: 188 (178)
Sequences: 334
Seq/Len: 1.88

YGGT
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
141_I 158_L 3.32 1.00
57_A 60_P 3.215 1.00
156_M 163_Y 3.209 1.00
135_D 142_R 2.199 0.99
25_M 30_C 2.023 0.99
156_M 159_V 1.901 0.98
113_M 134_A 1.836 0.98
115_I 119_V 1.818 0.97
32_F 41_V 1.719 0.96
8_L 11_V 1.65 0.95
47_I 50_P 1.637 0.94
52_R 62_D 1.593 0.93
16_T 72_L 1.589 0.93
45_Q 49_G 1.551 0.92
2_N 6_F 1.543 0.92
3_T 164_V 1.534 0.91
145_L 157_I 1.515 0.91
49_G 53_R 1.422 0.87
54_V 141_I 1.419 0.87
88_P 91_W 1.411 0.86
10_T 14_L 1.409 0.86
57_A 63_S 1.352 0.83
103_G 166_N 1.349 0.83
48_I 65_S 1.338 0.82
23_I 60_P 1.338 0.82
57_A 62_D 1.331 0.81
141_I 157_I 1.316 0.80
103_G 162_L 1.315 0.80
13_E 76_K 1.307 0.80
31_D 46_P 1.307 0.80
54_V 71_I 1.301 0.79
114_A 118_W 1.292 0.79
6_F 14_L 1.288 0.78
33_Y 132_Q 1.268 0.77
31_D 37_S 1.268 0.77
20_L 69_A 1.267 0.77
59_G 63_S 1.233 0.74
19_L 68_V 1.226 0.73
148_M 153_F 1.213 0.72
153_F 156_M 1.206 0.72
120_S 127_E 1.196 0.71
181_L 184_L 1.192 0.70
51_L 65_S 1.191 0.70
118_W 121_Q 1.178 0.69
18_V 60_P 1.172 0.68
94_G 118_W 1.146 0.66
7_L 130_L 1.138 0.65
57_A 64_A 1.13 0.64
138_L 158_L 1.129 0.64
106_I 109_V 1.123 0.64
114_A 117_S 1.115 0.63
83_V 116_M 1.101 0.61
31_D 132_Q 1.099 0.61
112_V 119_V 1.096 0.61
57_A 65_S 1.094 0.61
117_S 121_Q 1.088 0.60
59_G 149_G 1.086 0.60
20_L 27_W 1.085 0.60
24_W 133_L 1.08 0.59
118_W 122_G 1.075 0.59
30_C 37_S 1.066 0.58
7_L 80_L 1.063 0.57
137_L 141_I 1.061 0.57
42_K 132_Q 1.06 0.57
141_I 161_L 1.045 0.55
16_T 101_T 1.035 0.54
47_I 144_L 1.034 0.54
17_M 23_I 1.03 0.54
179_M 182_P 1.029 0.54
52_R 57_A 1.028 0.54
114_A 138_L 1.028 0.54
84_V 153_F 1.023 0.53
46_P 68_V 1.022 0.53
12_I 72_L 1.02 0.53
26_Q 41_V 1.016 0.52
32_F 38_Q 1.011 0.52
14_L 18_V 1.008 0.51
31_D 35_P 1.005 0.51
13_E 36_F 1.001 0.51
108_W 112_V 1.001 0.51
73_S 76_K 1.001 0.51
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
3j1rA210.13831.60.968Contact Map0.574
1oefA10.10641.10.972Contact Map0.184
4b19A10.15960.90.973Contact Map0.636
3arcI20.17020.70.975Contact Map0.231
2aghC10.16490.70.975Contact Map0.351
2l16A10.17550.60.977Contact Map0.526
3qrxB10.13830.50.977Contact Map0.332
1v9kA20.31910.50.977Contact Map0.141
1xioA10.30320.50.978Contact Map0.009
2lzrA10.17020.50.978Contact Map0.539

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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