| UniProt: | P62617 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11816 | ||
| Length: | 159 (157) | ||
| Sequences: | 1412 | ||
| Seq/Len: | 8.99 |
| ISPF
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 17_P | 24_R | 3.345 | 1.00 | |
| 33_A | 37_G | 2.939 | 1.00 | |
| 74_R | 119_D | 2.864 | 1.00 | |
| 79_E | 82_R | 2.611 | 1.00 | |
| 44_L | 94_V | 2.484 | 1.00 | |
| 41_L | 116_I | 2.337 | 1.00 | |
| 45_T | 80_A | 2.292 | 1.00 | |
| 40_A | 96_V | 2.27 | 1.00 | |
| 13_G | 32_L | 2.222 | 1.00 | |
| 21_G | 40_A | 2.209 | 1.00 | |
| 9_V | 137_L | 2.178 | 1.00 | |
| 48_L | 84_I | 2.16 | 1.00 | |
| 99_I | 149_E | 2.08 | 1.00 | |
| 44_L | 96_V | 2.06 | 1.00 | |
| 27_Y | 143_G | 1.958 | 1.00 | |
| 98_I | 105_M | 1.926 | 1.00 | |
| 122_C | 126_D | 1.918 | 1.00 | |
| 5_H | 149_E | 1.906 | 1.00 | |
| 79_E | 83_R | 1.821 | 1.00 | |
| 134_T | 140_T | 1.798 | 1.00 | |
| 102_A | 143_G | 1.748 | 1.00 | |
| 87_K | 125_D | 1.74 | 1.00 | |
| 3_I | 153_L | 1.724 | 1.00 | |
| 31_L | 37_G | 1.61 | 1.00 | |
| 59_K | 109_I | 1.608 | 1.00 | |
| 92_G | 155_I | 1.577 | 1.00 | |
| 52_A | 84_I | 1.488 | 1.00 | |
| 5_H | 97_T | 1.482 | 1.00 | |
| 71_A | 76_L | 1.476 | 1.00 | |
| 54_L | 87_K | 1.464 | 1.00 | |
| 100_A | 146_I | 1.446 | 0.99 | |
| 81_W | 120_L | 1.415 | 0.99 | |
| 84_I | 154_L | 1.414 | 0.99 | |
| 140_T | 147_A | 1.403 | 0.99 | |
| 68_F | 71_A | 1.384 | 0.99 | |
| 11_A | 32_L | 1.383 | 0.99 | |
| 41_L | 45_T | 1.382 | 0.99 | |
| 104_K | 107_P | 1.376 | 0.99 | |
| 91_L | 122_C | 1.369 | 0.99 | |
| 108_H | 111_Q | 1.361 | 0.99 | |
| 5_H | 151_V | 1.353 | 0.99 | |
| 115_F | 118_E | 1.342 | 0.99 | |
| 85_Q | 121_G | 1.337 | 0.99 | |
| 114_V | 118_E | 1.336 | 0.99 | |
| 74_R | 115_F | 1.331 | 0.99 | |
| 20_I | 105_M | 1.33 | 0.99 | |
| 111_Q | 114_V | 1.327 | 0.99 | |
| 114_V | 124_M | 1.317 | 0.99 | |
| 81_W | 91_L | 1.289 | 0.99 | |
| 7_F | 134_T | 1.284 | 0.99 | |
| 93_N | 153_L | 1.283 | 0.99 | |
| 66_P | 69_K | 1.278 | 0.98 | |
| 21_G | 112_M | 1.272 | 0.98 | |
| 85_Q | 90_T | 1.265 | 0.98 | |
| 82_R | 86_A | 1.26 | 0.98 | |
| 75_E | 78_R | 1.245 | 0.98 | |
| 51_A | 154_L | 1.243 | 0.98 | |
| 113_R | 124_M | 1.227 | 0.98 | |
| 63_D | 101_Q | 1.209 | 0.98 | |
| 99_I | 140_T | 1.197 | 0.97 | |
| 78_R | 119_D | 1.194 | 0.97 | |
| 90_T | 155_I | 1.178 | 0.97 | |
| 123_H | 126_D | 1.178 | 0.97 | |
| 139_F | 145_G | 1.163 | 0.97 | |
| 44_L | 116_I | 1.161 | 0.97 | |
| 101_Q | 136_K | 1.149 | 0.96 | |
| 20_I | 39_V | 1.148 | 0.96 | |
| 45_T | 76_L | 1.142 | 0.96 | |
| 60_L | 83_R | 1.138 | 0.96 | |
| 55_G | 59_K | 1.131 | 0.96 | |
| 53_A | 128_N | 1.12 | 0.96 | |
| 91_L | 94_V | 1.114 | 0.96 | |
| 110_P | 114_V | 1.109 | 0.95 | |
| 106_L | 110_P | 1.097 | 0.95 | |
| 81_W | 85_Q | 1.091 | 0.95 | |
| 89_Y | 156_K | 1.091 | 0.95 | |
| 17_P | 30_G | 1.088 | 0.95 | |
| 47_A | 150_A | 1.082 | 0.95 | |
| 50_G | 95_D | 1.081 | 0.94 | |
| 92_G | 153_L | 1.08 | 0.94 | |
| 52_A | 154_L | 1.079 | 0.94 | |
| 138_G | 145_G | 1.072 | 0.94 | |
| 9_V | 134_T | 1.07 | 0.94 | |
| 19_I | 24_R | 1.065 | 0.94 | |
| 9_V | 139_F | 1.061 | 0.94 | |
| 95_D | 130_K | 1.052 | 0.93 | |
| 31_L | 100_A | 1.03 | 0.92 | |
| 68_F | 76_L | 1.001 | 0.91 | |
| 110_P | 113_R | 1 | 0.91 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1gx1A | 3 | 1 | 100 | 0.018 | Contact Map | 0.875 |
| 3f0dA | 6 | 1 | 100 | 0.021 | Contact Map | 0.841 |
| 1t0aA | 3 | 0.9874 | 100 | 0.023 | Contact Map | 0.883 |
| 2pmpA | 1 | 0.9874 | 100 | 0.024 | Contact Map | 0.695 |
| 3re3A | 4 | 0.9811 | 100 | 0.025 | Contact Map | 0.812 |
| 2uzhA | 3 | 0.9811 | 100 | 0.048 | Contact Map | 0.735 |
| 3b6nA | 1 | 0.9937 | 100 | 0.054 | Contact Map | 0.696 |
| 1iv3A | 6 | 0.956 | 100 | 0.062 | Contact Map | 0.84 |
| 1w55A | 1 | 1 | 100 | 0.107 | Contact Map | 0.674 |
| 2wkbA | 6 | 0.434 | 42.1 | 0.947 | Contact Map | 0.387 |
Sequence Conservation (Image Generated using WebLogo v3)