| UniProt: | P62399 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10868 | ||
| Length: | 179 (179) | ||
| Sequences: | 1319 | ||
| Seq/Len: | 7.37 |
| RL5
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 3_K | 101_E | 4.601 | 1.00 | |
| 6_D | 10_D | 4.338 | 1.00 | |
| 36_L | 61_S | 3.809 | 1.00 | |
| 19_E | 168_A | 3.142 | 1.00 | |
| 7_Y | 11_E | 2.911 | 1.00 | |
| 129_S | 155_T | 2.828 | 1.00 | |
| 108_V | 111_I | 2.812 | 1.00 | |
| 34_I | 100_F | 2.792 | 1.00 | |
| 13_V | 28_V | 2.698 | 1.00 | |
| 103_L | 130_M | 2.463 | 1.00 | |
| 31_V | 156_I | 2.422 | 1.00 | |
| 132_V | 137_I | 2.415 | 1.00 | |
| 22_Y | 165_E | 2.182 | 1.00 | |
| 57_L | 87_C | 2.181 | 1.00 | |
| 15_K | 18_T | 2.165 | 1.00 | |
| 171_A | 179_K | 2.147 | 1.00 | |
| 27_Q | 161_K | 2.086 | 1.00 | |
| 7_Y | 12_V | 2.085 | 1.00 | |
| 142_D | 145_K | 2.077 | 1.00 | |
| 58_A | 64_K | 2.024 | 1.00 | |
| 17_M | 28_V | 2.005 | 1.00 | |
| 117_L | 175_F | 1.997 | 1.00 | |
| 35_T | 157_T | 1.948 | 1.00 | |
| 97_W | 173_F | 1.867 | 1.00 | |
| 168_A | 172_A | 1.845 | 1.00 | |
| 5_H | 9_K | 1.816 | 1.00 | |
| 58_A | 65_P | 1.783 | 1.00 | |
| 101_E | 105_T | 1.768 | 1.00 | |
| 124_G | 163_D | 1.766 | 1.00 | |
| 12_V | 173_F | 1.713 | 1.00 | |
| 162_S | 165_E | 1.616 | 1.00 | |
| 14_K | 18_T | 1.586 | 1.00 | |
| 19_E | 164_E | 1.572 | 1.00 | |
| 100_F | 156_I | 1.55 | 1.00 | |
| 98_E | 102_R | 1.53 | 1.00 | |
| 40_V | 53_A | 1.522 | 0.99 | |
| 119_A | 179_K | 1.517 | 0.99 | |
| 15_K | 172_A | 1.513 | 0.99 | |
| 88_K | 153_D | 1.494 | 0.99 | |
| 22_Y | 162_S | 1.485 | 0.99 | |
| 11_E | 15_K | 1.452 | 0.99 | |
| 168_A | 171_A | 1.407 | 0.99 | |
| 36_L | 152_L | 1.37 | 0.99 | |
| 167_R | 171_A | 1.363 | 0.99 | |
| 69_K | 84_P | 1.361 | 0.99 | |
| 34_I | 173_F | 1.359 | 0.99 | |
| 79_I | 85_I | 1.353 | 0.99 | |
| 38_M | 53_A | 1.34 | 0.98 | |
| 70_A | 73_S | 1.333 | 0.98 | |
| 70_A | 82_G | 1.327 | 0.98 | |
| 119_A | 167_R | 1.32 | 0.98 | |
| 9_K | 13_V | 1.291 | 0.98 | |
| 17_M | 25_V | 1.285 | 0.98 | |
| 2_A | 98_E | 1.284 | 0.98 | |
| 100_F | 104_I | 1.28 | 0.98 | |
| 136_I | 149_V | 1.271 | 0.98 | |
| 31_V | 34_I | 1.269 | 0.97 | |
| 68_T | 88_K | 1.259 | 0.97 | |
| 164_E | 167_R | 1.252 | 0.97 | |
| 44_I | 85_I | 1.245 | 0.97 | |
| 32_E | 159_T | 1.224 | 0.97 | |
| 55_A | 59_A | 1.217 | 0.97 | |
| 38_M | 57_L | 1.216 | 0.97 | |
| 73_S | 81_Q | 1.2 | 0.96 | |
| 15_K | 19_E | 1.172 | 0.95 | |
| 8_Y | 13_V | 1.168 | 0.95 | |
| 117_L | 130_M | 1.164 | 0.95 | |
| 147_D | 150_R | 1.159 | 0.95 | |
| 14_K | 17_M | 1.156 | 0.95 | |
| 108_V | 117_L | 1.154 | 0.95 | |
| 54_A | 67_I | 1.15 | 0.95 | |
| 136_I | 143_Y | 1.146 | 0.95 | |
| 52_N | 147_D | 1.142 | 0.95 | |
| 34_I | 104_I | 1.141 | 0.95 | |
| 31_V | 100_F | 1.127 | 0.94 | |
| 25_V | 28_V | 1.1 | 0.93 | |
| 54_A | 58_A | 1.092 | 0.93 | |
| 5_H | 94_E | 1.09 | 0.93 | |
| 123_D | 127_N | 1.078 | 0.92 | |
| 2_A | 94_E | 1.054 | 0.91 | |
| 40_V | 50_L | 1.053 | 0.91 | |
| 61_S | 66_L | 1.052 | 0.91 | |
| 19_E | 172_A | 1.049 | 0.91 | |
| 1_M | 6_D | 1.028 | 0.89 | |
| 121_S | 153_D | 1.024 | 0.89 | |
| 158_T | 166_G | 1.01 | 0.88 | |
| 45_A | 76_G | 1.006 | 0.88 | |
| 50_L | 87_C | 1 | 0.88 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kixF | 1 | 1 | 100 | 0.049 | Contact Map | 0.697 |
| 3bboH | 1 | 1 | 100 | 0.052 | Contact Map | 0.579 |
| 1iq4A | 2 | 1 | 100 | 0.053 | Contact Map | 0.795 |
| 1mjiA | 2 | 1 | 100 | 0.058 | Contact Map | 0.788 |
| 3j21E | 1 | 0.9162 | 100 | 0.298 | Contact Map | 0.473 |
| 1vq8D | 1 | 0.8715 | 100 | 0.305 | Contact Map | 0.565 |
| 3iz5E | 1 | 0.8603 | 100 | 0.33 | Contact Map | 0.408 |
| 3j3bJ | 1 | 0.8659 | 100 | 0.331 | Contact Map | 0.719 |
| 3zf7L | 1 | 0.8883 | 100 | 0.339 | Contact Map | 0.601 |
| 4a17D | 1 | 0.8492 | 100 | 0.344 | Contact Map | 0.596 |
Sequence Conservation (Image Generated using WebLogo v3)