| UniProt: | P52102 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13215 | ||
| Length: | 86 (82) | ||
| Sequences: | 892 | ||
| Seq/Len: | 10.88 |
| YFHL
Paralog alert: 0.29 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 8_K | 56_I | 2.643 | 1.00 | |
| 37_K | 80_M | 2.363 | 1.00 | |
| 25_S | 34_N | 2.286 | 1.00 | |
| 75_D | 79_L | 2.227 | 1.00 | |
| 47_T | 52_K | 2.204 | 1.00 | |
| 66_H | 74_W | 2.036 | 1.00 | |
| 61_V | 67_V | 1.928 | 1.00 | |
| 5_I | 24_I | 1.9 | 1.00 | |
| 68_E | 71_E | 1.798 | 1.00 | |
| 72_Q | 75_D | 1.758 | 1.00 | |
| 13_D | 31_Y | 1.731 | 1.00 | |
| 75_D | 78_V | 1.726 | 1.00 | |
| 18_E | 53_V | 1.671 | 1.00 | |
| 25_S | 32_E | 1.67 | 1.00 | |
| 74_W | 78_V | 1.585 | 1.00 | |
| 23_A | 37_K | 1.473 | 1.00 | |
| 3_L | 51_Q | 1.451 | 1.00 | |
| 2_A | 74_W | 1.447 | 1.00 | |
| 11_N | 29_H | 1.385 | 0.99 | |
| 6_T | 61_V | 1.371 | 0.99 | |
| 30_I | 76_K | 1.357 | 0.99 | |
| 34_N | 37_K | 1.315 | 0.99 | |
| 4_L | 64_P | 1.255 | 0.99 | |
| 2_A | 56_I | 1.244 | 0.98 | |
| 71_E | 74_W | 1.218 | 0.98 | |
| 42_V | 70_E | 1.197 | 0.98 | |
| 69_T | 72_Q | 1.185 | 0.98 | |
| 62_K | 67_V | 1.171 | 0.98 | |
| 63_D | 66_H | 1.127 | 0.97 | |
| 12_C | 24_I | 1.103 | 0.96 | |
| 21_N | 39_T | 1.096 | 0.96 | |
| 5_I | 13_D | 1.087 | 0.96 | |
| 64_P | 67_V | 1.073 | 0.95 | |
| 24_I | 81_H | 1.07 | 0.95 | |
| 30_I | 80_M | 1.051 | 0.94 | |
| 7_K | 59_T | 1.028 | 0.94 | |
| 18_E | 39_T | 1.01 | 0.93 | |
| 23_A | 62_K | 1.009 | 0.93 | |
| 60_I | 77_F | 1.001 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3eunA | 1 | 0.9535 | 99.3 | 0.58 | Contact Map | 0.533 |
| 2fgoA | 1 | 0.9535 | 99.3 | 0.586 | Contact Map | 0.543 |
| 2zvsA | 3 | 0.9884 | 99.3 | 0.591 | Contact Map | 0.551 |
| 1rgvA | 1 | 0.9302 | 99.3 | 0.592 | Contact Map | 0.516 |
| 1bc6A | 1 | 0.8721 | 99.2 | 0.601 | Contact Map | 0.431 |
| 7fd1A | 1 | 0.907 | 99.2 | 0.601 | Contact Map | 0.644 |
| 2v2kA | 2 | 0.907 | 99.2 | 0.606 | Contact Map | 0.532 |
| 1h98A | 1 | 0.8837 | 99.2 | 0.61 | Contact Map | 0.636 |
| 2fdnA | 1 | 0.6395 | 98.9 | 0.647 | Contact Map | 0.664 |
| 1hfeL | 2 | 0.9186 | 98.8 | 0.659 | Contact Map | 0.34 |
Sequence Conservation (Image Generated using WebLogo v3)