| UniProt: | P31057 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11675 | ||
| Length: | 264 (263) | ||
| Sequences: | 1511 | ||
| Seq/Len: | 5.75 |
| PANB
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 18_R | 254_G | 3.79 | 1.00 | |
| 235_A | 238_G | 3.16 | 1.00 | |
| 88_M | 101_A | 3.062 | 1.00 | |
| 189_K | 193_E | 3.056 | 1.00 | |
| 123_V | 170_L | 2.979 | 1.00 | |
| 21_T | 212_I | 2.89 | 1.00 | |
| 233_F | 250_E | 2.822 | 1.00 | |
| 48_G | 60_V | 2.711 | 1.00 | |
| 69_T | 83_A | 2.566 | 1.00 | |
| 62_V | 99_N | 2.554 | 1.00 | |
| 189_K | 207_V | 2.466 | 1.00 | |
| 171_E | 195_L | 2.453 | 1.00 | |
| 192_T | 199_V | 2.419 | 1.00 | |
| 231_K | 261_H | 2.398 | 1.00 | |
| 62_V | 89_A | 2.36 | 1.00 | |
| 171_E | 196_A | 2.359 | 1.00 | |
| 13_K | 209_D | 2.359 | 1.00 | |
| 231_K | 250_E | 2.332 | 1.00 | |
| 52_Q | 67_Y | 2.329 | 1.00 | |
| 17_K | 252_E | 2.187 | 1.00 | |
| 117_E | 165_S | 2.124 | 1.00 | |
| 95_Q | 98_E | 2.087 | 1.00 | |
| 85_L | 99_N | 2.077 | 1.00 | |
| 168_L | 194_A | 2.075 | 1.00 | |
| 124_Q | 128_E | 2.058 | 1.00 | |
| 20_A | 248_M | 1.994 | 1.00 | |
| 239_D | 242_A | 1.952 | 1.00 | |
| 134_C | 177_L | 1.929 | 1.00 | |
| 12_Y | 19_F | 1.912 | 1.00 | |
| 134_C | 176_Q | 1.879 | 1.00 | |
| 161_D | 165_S | 1.836 | 1.00 | |
| 73_R | 81_L | 1.832 | 1.00 | |
| 33_F | 41_M | 1.83 | 1.00 | |
| 135_G | 170_L | 1.815 | 1.00 | |
| 249_A | 253_S | 1.796 | 1.00 | |
| 56_S | 59_P | 1.775 | 1.00 | |
| 38_L | 248_M | 1.768 | 1.00 | |
| 11_K | 15_E | 1.749 | 1.00 | |
| 234_L | 239_D | 1.741 | 1.00 | |
| 248_M | 252_E | 1.735 | 1.00 | |
| 190_R | 194_A | 1.698 | 1.00 | |
| 33_F | 244_V | 1.681 | 1.00 | |
| 162_Q | 166_D | 1.675 | 1.00 | |
| 64_D | 70_A | 1.661 | 1.00 | |
| 40_V | 212_I | 1.646 | 1.00 | |
| 258_G | 261_H | 1.64 | 1.00 | |
| 34_A | 79_C | 1.636 | 1.00 | |
| 170_L | 175_A | 1.622 | 0.99 | |
| 226_I | 232_N | 1.607 | 0.99 | |
| 62_V | 103_V | 1.594 | 0.99 | |
| 175_A | 197_I | 1.587 | 0.99 | |
| 168_L | 171_E | 1.563 | 0.99 | |
| 69_T | 108_A | 1.525 | 0.99 | |
| 9_L | 40_V | 1.514 | 0.99 | |
| 66_A | 103_V | 1.514 | 0.99 | |
| 178_L | 199_V | 1.513 | 0.99 | |
| 69_T | 106_A | 1.501 | 0.99 | |
| 153_Q | 159_A | 1.466 | 0.99 | |
| 90_Y | 113_I | 1.461 | 0.99 | |
| 250_E | 255_V | 1.454 | 0.99 | |
| 238_G | 242_A | 1.449 | 0.99 | |
| 171_E | 197_I | 1.434 | 0.98 | |
| 12_Y | 17_K | 1.433 | 0.98 | |
| 63_A | 102_T | 1.427 | 0.98 | |
| 83_A | 106_A | 1.424 | 0.98 | |
| 135_G | 175_A | 1.422 | 0.98 | |
| 135_G | 179_V | 1.419 | 0.98 | |
| 168_L | 195_L | 1.418 | 0.98 | |
| 140_T | 147_F | 1.411 | 0.98 | |
| 103_V | 106_A | 1.407 | 0.98 | |
| 156_G | 159_A | 1.405 | 0.98 | |
| 125_M | 129_R | 1.388 | 0.98 | |
| 242_A | 246_Q | 1.367 | 0.98 | |
| 52_Q | 71_A | 1.36 | 0.98 | |
| 83_A | 103_V | 1.347 | 0.97 | |
| 96_A | 122_T | 1.342 | 0.97 | |
| 76_A | 81_L | 1.338 | 0.97 | |
| 178_L | 195_L | 1.336 | 0.97 | |
| 93_P | 122_T | 1.328 | 0.97 | |
| 110_M | 176_Q | 1.313 | 0.97 | |
| 137_L | 180_L | 1.308 | 0.97 | |
| 185_V | 262_S | 1.308 | 0.97 | |
| 82_L | 179_V | 1.3 | 0.97 | |
| 54_H | 74_R | 1.288 | 0.96 | |
| 109_N | 145_N | 1.287 | 0.96 | |
| 66_A | 106_A | 1.267 | 0.96 | |
| 29_F | 215_M | 1.26 | 0.96 | |
| 219_F | 240_I | 1.251 | 0.95 | |
| 206_N | 262_S | 1.251 | 0.95 | |
| 22_I | 218_A | 1.251 | 0.95 | |
| 41_M | 76_A | 1.243 | 0.95 | |
| 178_L | 197_I | 1.231 | 0.95 | |
| 179_V | 197_I | 1.228 | 0.95 | |
| 19_F | 210_G | 1.216 | 0.94 | |
| 33_F | 215_M | 1.189 | 0.94 | |
| 85_L | 100_A | 1.181 | 0.93 | |
| 137_L | 163_L | 1.177 | 0.93 | |
| 164_L | 190_R | 1.174 | 0.93 | |
| 118_W | 162_Q | 1.164 | 0.93 | |
| 21_T | 40_V | 1.158 | 0.92 | |
| 54_H | 59_P | 1.149 | 0.92 | |
| 232_N | 235_A | 1.148 | 0.92 | |
| 97_F | 126_L | 1.146 | 0.92 | |
| 34_A | 78_N | 1.143 | 0.92 | |
| 82_L | 110_M | 1.139 | 0.91 | |
| 192_T | 208_T | 1.139 | 0.91 | |
| 97_F | 125_M | 1.132 | 0.91 | |
| 51_V | 216_H | 1.12 | 0.91 | |
| 20_A | 252_E | 1.116 | 0.90 | |
| 185_V | 207_V | 1.115 | 0.90 | |
| 199_V | 208_T | 1.106 | 0.90 | |
| 54_H | 64_D | 1.106 | 0.90 | |
| 48_G | 64_D | 1.094 | 0.89 | |
| 35_D | 241_R | 1.075 | 0.88 | |
| 93_P | 125_M | 1.071 | 0.88 | |
| 47_L | 68_H | 1.07 | 0.88 | |
| 95_Q | 99_N | 1.067 | 0.87 | |
| 34_A | 77_P | 1.064 | 0.87 | |
| 222_T | 225_H | 1.057 | 0.87 | |
| 47_L | 60_V | 1.047 | 0.86 | |
| 121_E | 124_Q | 1.043 | 0.86 | |
| 139_L | 182_C | 1.027 | 0.85 | |
| 245_R | 249_A | 1.024 | 0.84 | |
| 66_A | 102_T | 1.016 | 0.84 | |
| 188_A | 208_T | 1.012 | 0.83 | |
| 120_V | 166_D | 1.008 | 0.83 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1o66A | 5 | 0.9962 | 100 | 0.197 | Contact Map | 0.811 |
| 1m3uA | 10 | 1 | 100 | 0.198 | Contact Map | 0.783 |
| 1oy0A | 5 | 0.9924 | 100 | 0.205 | Contact Map | 0.653 |
| 3vavA | 10 | 0.9962 | 100 | 0.217 | Contact Map | 0.836 |
| 4lsbA | 2 | 0.9053 | 100 | 0.522 | Contact Map | 0.477 |
| 4mg4A | 8 | 0.8864 | 100 | 0.59 | Contact Map | 0.558 |
| 3lyeA | 1 | 0.9242 | 100 | 0.609 | Contact Map | 0.463 |
| 2qiwA | 2 | 0.8826 | 100 | 0.609 | Contact Map | 0.607 |
| 3eooA | 16 | 0.9167 | 100 | 0.615 | Contact Map | 0.528 |
| 1xg4A | 4 | 0.9167 | 100 | 0.616 | Contact Map | 0.519 |
Sequence Conservation (Image Generated using WebLogo v3)