| UniProt: | P30748 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11597 | ||
| Length: | 81 (81) | ||
| Sequences: | 1155 | ||
| Seq/Len: | 14.26 |
| MOAD
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 56_N | 70_D | 4.46 | 1.00 | |
| 6_F | 19_T | 3.629 | 1.00 | |
| 57_Q | 71_E | 2.644 | 1.00 | |
| 3_K | 18_A | 2.629 | 1.00 | |
| 55_V | 64_H | 2.155 | 1.00 | |
| 7_F | 73_A | 2.114 | 1.00 | |
| 27_T | 30_A | 1.987 | 1.00 | |
| 31_L | 66_L | 1.953 | 1.00 | |
| 75_F | 79_T | 1.881 | 1.00 | |
| 39_S | 42_W | 1.755 | 1.00 | |
| 60_V | 64_H | 1.704 | 1.00 | |
| 31_L | 72_V | 1.692 | 1.00 | |
| 9_Q | 13_L | 1.692 | 1.00 | |
| 25_F | 34_H | 1.675 | 1.00 | |
| 28_V | 53_A | 1.663 | 1.00 | |
| 2_I | 69_G | 1.662 | 1.00 | |
| 32_R | 74_F | 1.655 | 1.00 | |
| 75_F | 78_V | 1.614 | 1.00 | |
| 22_A | 25_F | 1.566 | 1.00 | |
| 54_A | 73_A | 1.481 | 1.00 | |
| 54_A | 59_L | 1.474 | 1.00 | |
| 67_T | 70_D | 1.406 | 0.99 | |
| 26_P | 30_A | 1.365 | 0.99 | |
| 6_F | 16_T | 1.242 | 0.98 | |
| 54_A | 57_Q | 1.234 | 0.98 | |
| 6_F | 14_V | 1.201 | 0.98 | |
| 11_R | 17_D | 1.185 | 0.98 | |
| 6_F | 74_F | 1.181 | 0.98 | |
| 32_R | 62_F | 1.178 | 0.98 | |
| 59_L | 75_F | 1.174 | 0.98 | |
| 16_T | 19_T | 1.153 | 0.97 | |
| 30_A | 33_Q | 1.006 | 0.93 | |
| 71_E | 79_T | 1.003 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1vjkA | 1 | 1 | 99.8 | 0.121 | Contact Map | 0.753 |
| 1fm0D | 1 | 1 | 99.8 | 0.133 | Contact Map | 0.853 |
| 2k9xA | 1 | 0.9877 | 99.8 | 0.143 | Contact Map | 0.47 |
| 1wgkA | 1 | 1 | 99.8 | 0.143 | Contact Map | 0.513 |
| 3po0A | 1 | 1 | 99.7 | 0.145 | Contact Map | 0.714 |
| 4hroA | 2 | 1 | 99.7 | 0.151 | Contact Map | 0.725 |
| 2qjlA | 1 | 1 | 99.7 | 0.152 | Contact Map | 0.603 |
| 2q5wD | 1 | 0.9383 | 99.7 | 0.186 | Contact Map | 0.772 |
| 2m19A | 1 | 1 | 99.7 | 0.186 | Contact Map | 0.625 |
| 2g1eA | 1 | 0.9877 | 99.7 | 0.193 | Contact Map | 0.61 |
Sequence Conservation (Image Generated using WebLogo v3)