| UniProt: | P0C0L2 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10680 | ||
| Length: | 143 (142) | ||
| Sequences: | 1244 | ||
| Seq/Len: | 8.76 |
| OSMC
Paralog alert: 0.25 [within 20: 0.02] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 110_D | 113_T | 3.826 | 1.00 | |
| 111_A | 115_D | 3.447 | 1.00 | |
| 115_D | 119_Q | 3.437 | 1.00 | |
| 14_D | 17_R | 2.917 | 1.00 | |
| 71_A | 120_K | 2.82 | 1.00 | |
| 113_T | 116_G | 2.599 | 1.00 | |
| 106_V | 114_F | 2.361 | 1.00 | |
| 61_S | 78_I | 2.248 | 1.00 | |
| 84_V | 100_L | 2.18 | 1.00 | |
| 22_V | 54_A | 2.155 | 1.00 | |
| 116_G | 120_K | 2.145 | 1.00 | |
| 26_S | 50_E | 2.033 | 1.00 | |
| 103_E | 140_Q | 2.016 | 1.00 | |
| 95_I | 127_V | 2.01 | 1.00 | |
| 8_Q | 83_D | 2.009 | 1.00 | |
| 83_D | 101_K | 1.982 | 1.00 | |
| 67_M | 124_G | 1.959 | 1.00 | |
| 15_I | 66_L | 1.913 | 1.00 | |
| 119_Q | 123_A | 1.913 | 1.00 | |
| 85_S | 96_T | 1.899 | 1.00 | |
| 101_K | 138_D | 1.87 | 1.00 | |
| 82_A | 102_S | 1.8 | 1.00 | |
| 61_S | 80_T | 1.768 | 1.00 | |
| 101_K | 136_T | 1.724 | 1.00 | |
| 103_E | 138_D | 1.638 | 1.00 | |
| 10_H | 81_T | 1.592 | 1.00 | |
| 36_F | 40_F | 1.571 | 1.00 | |
| 21_T | 31_Q | 1.494 | 1.00 | |
| 52_I | 127_V | 1.494 | 1.00 | |
| 10_H | 79_D | 1.491 | 1.00 | |
| 60_F | 118_I | 1.442 | 0.99 | |
| 23_S | 31_Q | 1.433 | 0.99 | |
| 118_I | 139_Y | 1.428 | 0.99 | |
| 23_S | 27_G | 1.366 | 0.99 | |
| 11_W | 57_A | 1.349 | 0.99 | |
| 130_V | 133_A | 1.31 | 0.99 | |
| 89_V | 129_Q | 1.309 | 0.99 | |
| 71_A | 116_G | 1.304 | 0.99 | |
| 56_H | 100_L | 1.296 | 0.99 | |
| 66_L | 70_E | 1.295 | 0.99 | |
| 83_D | 103_E | 1.29 | 0.98 | |
| 73_F | 113_T | 1.288 | 0.98 | |
| 8_Q | 81_T | 1.285 | 0.98 | |
| 89_V | 94_A | 1.26 | 0.98 | |
| 7_G | 25_E | 1.245 | 0.98 | |
| 63_A | 67_M | 1.237 | 0.98 | |
| 62_M | 95_I | 1.228 | 0.98 | |
| 67_M | 117_I | 1.222 | 0.98 | |
| 22_V | 32_Q | 1.209 | 0.97 | |
| 24_T | 46_T | 1.207 | 0.97 | |
| 9_A | 24_T | 1.198 | 0.97 | |
| 52_I | 131_L | 1.187 | 0.97 | |
| 11_W | 22_V | 1.183 | 0.97 | |
| 109_I | 113_T | 1.18 | 0.97 | |
| 21_T | 33_P | 1.176 | 0.97 | |
| 6_K | 83_D | 1.174 | 0.97 | |
| 28_V | 45_G | 1.172 | 0.97 | |
| 97_K | 134_E | 1.169 | 0.97 | |
| 8_Q | 25_E | 1.164 | 0.97 | |
| 61_S | 65_S | 1.152 | 0.96 | |
| 120_K | 124_G | 1.127 | 0.96 | |
| 64_L | 71_A | 1.114 | 0.95 | |
| 46_T | 50_E | 1.072 | 0.94 | |
| 61_S | 79_D | 1.065 | 0.94 | |
| 11_W | 61_S | 1.035 | 0.92 | |
| 24_T | 54_A | 1.023 | 0.92 | |
| 64_L | 121_A | 1.021 | 0.92 | |
| 6_K | 85_S | 1.017 | 0.91 | |
| 42_G | 45_G | 1.013 | 0.91 | |
| 36_F | 62_M | 1.009 | 0.91 | |
| 76_T | 105_A | 1.004 | 0.91 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1nyeA | 6 | 0.993 | 100 | 0.322 | Contact Map | 0.53 |
| 1qwiA | 4 | 0.993 | 100 | 0.35 | Contact Map | 0.529 |
| 1ukkA | 2 | 0.979 | 100 | 0.365 | Contact Map | 0.576 |
| 1uspA | 1 | 0.951 | 100 | 0.384 | Contact Map | 0.543 |
| 4mh4A | 2 | 0.9371 | 100 | 0.386 | Contact Map | 0.678 |
| 1n2fA | 2 | 0.9371 | 100 | 0.388 | Contact Map | 0.778 |
| 1zb9A | 2 | 0.951 | 100 | 0.397 | Contact Map | 0.783 |
| 3eerA | 1 | 0.9441 | 100 | 0.411 | Contact Map | 0.507 |
| 2ql8A | 2 | 0.9231 | 100 | 0.413 | Contact Map | 0.705 |
| 2bjoA | 2 | 0.9091 | 100 | 0.422 | Contact Map | 0.791 |
Sequence Conservation (Image Generated using WebLogo v3)