| UniProt: | P0AGK4 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12794 | ||
| Length: | 97 (97) | ||
| Sequences: | 679 | ||
| Seq/Len: | 7.00 |
| YHBY
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 15_A | 83_V | 4.29 | 1.00 | |
| 38_E | 86_R | 3.61 | 1.00 | |
| 10_H | 14_L | 2.816 | 1.00 | |
| 5_T | 8_K | 2.564 | 1.00 | |
| 93_I | 96_P | 2.259 | 1.00 | |
| 21_V | 40_A | 2.082 | 1.00 | |
| 60_T | 64_E | 2.015 | 1.00 | |
| 5_T | 9_Q | 1.867 | 1.00 | |
| 59_K | 80_K | 1.712 | 1.00 | |
| 65_A | 69_E | 1.692 | 1.00 | |
| 22_V | 33_V | 1.66 | 1.00 | |
| 37_I | 66_I | 1.638 | 1.00 | |
| 67_V | 84_L | 1.586 | 1.00 | |
| 12_K | 76_Q | 1.526 | 0.99 | |
| 10_H | 96_P | 1.453 | 0.99 | |
| 76_Q | 83_V | 1.401 | 0.99 | |
| 42_E | 88_T | 1.394 | 0.99 | |
| 78_I | 83_V | 1.386 | 0.99 | |
| 9_Q | 12_K | 1.321 | 0.98 | |
| 92_K | 96_P | 1.321 | 0.98 | |
| 28_G | 57_E | 1.238 | 0.97 | |
| 21_V | 44_H | 1.235 | 0.97 | |
| 50_K | 81_T | 1.217 | 0.96 | |
| 67_V | 74_N | 1.184 | 0.95 | |
| 38_E | 42_E | 1.16 | 0.95 | |
| 14_L | 93_I | 1.142 | 0.94 | |
| 21_V | 47_I | 1.142 | 0.94 | |
| 16_H | 59_K | 1.099 | 0.92 | |
| 42_E | 89_K | 1.09 | 0.92 | |
| 57_E | 62_I | 1.081 | 0.91 | |
| 55_D | 58_T | 1.042 | 0.89 | |
| 41_L | 86_R | 1.04 | 0.89 | |
| 30_T | 33_V | 1.036 | 0.89 | |
| 88_T | 91_R | 1.021 | 0.88 | |
| 67_V | 72_A | 1.019 | 0.88 | |
| 18_L | 44_H | 1.011 | 0.87 | |
| 36_E | 80_K | 1.005 | 0.87 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1jo0A | 2 | 1 | 100 | 0.097 | Contact Map | 0.72 |
| 1rq8A | 1 | 0.9897 | 100 | 0.14 | Contact Map | 0.512 |
| 3sbxA | 8 | 0.6289 | 28.3 | 0.911 | Contact Map | 0.32 |
| 3quaA | 2 | 0.6392 | 19.4 | 0.918 | Contact Map | 0.237 |
| 3u5iq | 1 | 0.9691 | 15.8 | 0.921 | Contact Map | 0.149 |
| 1hsjA | 2 | 0.8557 | 12.3 | 0.925 | Contact Map | 0.394 |
| 1t35A | 8 | 0.7629 | 11.6 | 0.925 | Contact Map | 0.328 |
| 4j80A | 4 | 0.3402 | 10.3 | 0.927 | Contact Map | 0.782 |
| 4kix5 | 1 | 0.9278 | 8.4 | 0.93 | Contact Map | 0.125 |
| 4hubG | 1 | 0.9588 | 7.8 | 0.931 | Contact Map | 0.238 |
Sequence Conservation (Image Generated using WebLogo v3)