| UniProt: | P0AG59 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10913 | ||
| Length: | 101 (101) | ||
| Sequences: | 1084 | ||
| Seq/Len: | 10.73 |
| RS14
Paralog alert: 0.04 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 8_A | 11_V | 3.277 | 1.00 | |
| 61_R | 71_H | 3.079 | 1.00 | |
| 14_V | 60_Q | 2.83 | 1.00 | |
| 10_E | 14_V | 2.761 | 1.00 | |
| 64_C | 67_T | 2.735 | 1.00 | |
| 17_A | 60_Q | 2.722 | 1.00 | |
| 16_L | 55_S | 2.342 | 1.00 | |
| 33_D | 36_A | 2.315 | 1.00 | |
| 62_N | 73_F | 2.254 | 1.00 | |
| 51_L | 55_S | 2.245 | 1.00 | |
| 74_L | 84_V | 2.182 | 1.00 | |
| 11_V | 14_V | 2.105 | 1.00 | |
| 4_Q | 7_K | 2.095 | 1.00 | |
| 10_E | 60_Q | 1.964 | 1.00 | |
| 31_I | 45_V | 1.908 | 1.00 | |
| 21_F | 25_A | 1.836 | 1.00 | |
| 84_V | 96_L | 1.75 | 1.00 | |
| 93_I | 96_L | 1.621 | 1.00 | |
| 88_A | 96_L | 1.605 | 1.00 | |
| 29_A | 32_S | 1.519 | 1.00 | |
| 65_R | 78_G | 1.311 | 0.99 | |
| 20_Y | 55_S | 1.309 | 0.99 | |
| 77_F | 96_L | 1.277 | 0.99 | |
| 53_R | 58_S | 1.205 | 0.98 | |
| 83_K | 86_E | 1.187 | 0.98 | |
| 84_V | 93_I | 1.165 | 0.97 | |
| 29_A | 33_D | 1.163 | 0.97 | |
| 28_K | 48_L | 1.154 | 0.97 | |
| 16_L | 56_S | 1.119 | 0.96 | |
| 46_L | 50_T | 1.111 | 0.96 | |
| 32_S | 45_V | 1.109 | 0.96 | |
| 36_A | 41_R | 1.108 | 0.96 | |
| 31_I | 48_L | 1.1 | 0.96 | |
| 86_E | 90_R | 1.084 | 0.96 | |
| 6_M | 9_R | 1.065 | 0.95 | |
| 87_A | 92_E | 1.059 | 0.95 | |
| 30_I | 44_A | 1.048 | 0.94 | |
| 4_Q | 8_A | 1.046 | 0.94 | |
| 80_S | 83_K | 1.044 | 0.94 | |
| 10_E | 13_R | 1.041 | 0.94 | |
| 52_P | 55_S | 1.037 | 0.94 | |
| 89_M | 93_I | 1.033 | 0.94 | |
| 26_E | 30_I | 1.021 | 0.93 | |
| 20_Y | 51_L | 1.019 | 0.93 | |
| 1_M | 5_S | 1.011 | 0.93 | |
| 17_A | 21_F | 1.009 | 0.93 | |
| 67_T | 83_K | 1.008 | 0.93 | |
| 14_V | 18_D | 1.005 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kiyN | 1 | 1 | 100 | 0.057 | Contact Map | 0.722 |
| 3bbnN | 1 | 0.9901 | 100 | 0.074 | Contact Map | 0.58 |
| 2vqeN | 1 | 0.604 | 99.8 | 0.445 | Contact Map | 0.687 |
| 3j3ad | 1 | 0.5347 | 99.4 | 0.61 | Contact Map | 0.61 |
| 3u5cd | 1 | 0.5347 | 99.4 | 0.612 | Contact Map | 0.627 |
| 3zey8 | 1 | 0.5248 | 99.3 | 0.628 | Contact Map | 0.656 |
| 4bpeN | 1 | 0.5248 | 99.3 | 0.637 | Contact Map | 0.617 |
| 3j20P | 1 | 0.5347 | 99.2 | 0.654 | Contact Map | 0.458 |
| 2kfsA | 1 | 0.6238 | 4.4 | 0.941 | Contact Map | 0.371 |
| 4j2nA | 5 | 0.396 | 4.3 | 0.941 | Contact Map | 0.413 |
Sequence Conservation (Image Generated using WebLogo v3)