| UniProt: | P0AFJ1 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10711 | ||
| Length: | 111 (111) | ||
| Sequences: | 529 | ||
| Seq/Len: | 4.77 |
| PHNA
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 57_S | 81_N | 2.69 | 1.00 | |
| 66_V | 71_S | 2.354 | 1.00 | |
| 60_I | 73_L | 2.085 | 1.00 | |
| 72_M | 98_F | 2.022 | 1.00 | |
| 45_K | 51_L | 2.013 | 1.00 | |
| 92_D | 102_K | 1.871 | 1.00 | |
| 17_D | 22_I | 1.829 | 1.00 | |
| 11_S | 25_E | 1.794 | 1.00 | |
| 73_L | 98_F | 1.766 | 1.00 | |
| 90_N | 105_S | 1.745 | 1.00 | |
| 3_L | 14_T | 1.694 | 0.99 | |
| 91_I | 108_V | 1.68 | 0.99 | |
| 90_N | 106_E | 1.676 | 0.99 | |
| 59_T | 75_I | 1.659 | 0.99 | |
| 3_L | 21_Y | 1.631 | 0.99 | |
| 5_H | 48_N | 1.518 | 0.98 | |
| 21_Y | 92_D | 1.503 | 0.98 | |
| 21_Y | 32_D | 1.498 | 0.98 | |
| 3_L | 16_E | 1.48 | 0.98 | |
| 42_L | 90_N | 1.43 | 0.98 | |
| 31_N | 34_E | 1.427 | 0.98 | |
| 5_H | 10_N | 1.41 | 0.97 | |
| 59_T | 111_N | 1.4 | 0.97 | |
| 44_V | 90_N | 1.394 | 0.97 | |
| 75_I | 98_F | 1.377 | 0.97 | |
| 60_I | 98_F | 1.375 | 0.97 | |
| 4_P | 21_Y | 1.364 | 0.96 | |
| 22_I | 27_A | 1.348 | 0.96 | |
| 5_H | 21_Y | 1.33 | 0.96 | |
| 42_L | 51_L | 1.31 | 0.95 | |
| 15_Y | 22_I | 1.29 | 0.95 | |
| 19_G | 22_I | 1.269 | 0.94 | |
| 44_V | 105_S | 1.265 | 0.94 | |
| 79_V | 95_I | 1.26 | 0.94 | |
| 33_A | 37_Q | 1.243 | 0.93 | |
| 16_E | 19_G | 1.24 | 0.93 | |
| 71_S | 98_F | 1.229 | 0.93 | |
| 22_I | 29_E | 1.214 | 0.92 | |
| 34_E | 39_S | 1.144 | 0.89 | |
| 13_Y | 92_D | 1.136 | 0.88 | |
| 79_V | 101_M | 1.126 | 0.88 | |
| 8_K | 28_Y | 1.113 | 0.87 | |
| 66_V | 73_L | 1.105 | 0.86 | |
| 3_L | 13_Y | 1.105 | 0.86 | |
| 13_Y | 25_E | 1.086 | 0.85 | |
| 89_H | 99_G | 1.084 | 0.85 | |
| 14_T | 27_A | 1.07 | 0.84 | |
| 48_N | 80_K | 1.05 | 0.82 | |
| 2_S | 10_N | 1.033 | 0.81 | |
| 25_E | 108_V | 1.028 | 0.80 | |
| 5_H | 20_M | 1.027 | 0.80 | |
| 15_Y | 29_E | 1.02 | 0.80 | |
| 13_Y | 16_E | 1.019 | 0.80 | |
| 20_M | 31_N | 1.019 | 0.80 | |
| 33_A | 40_D | 1.01 | 0.79 | |
| 45_K | 70_S | 1 | 0.78 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2aklA | 1 | 1 | 100 | 0.064 | Contact Map | 0.477 |
| 2akkA | 1 | 0.6486 | 100 | 0.423 | Contact Map | 0.436 |
| 1vd4A | 1 | 0.3874 | 96.4 | 0.879 | Contact Map | 0.382 |
| 1qypA | 1 | 0.3063 | 95.9 | 0.884 | Contact Map | 0.465 |
| 2gmgA | 1 | 0.3604 | 93.8 | 0.897 | Contact Map | 0.262 |
| 3o9xA | 2 | 0.973 | 88.6 | 0.91 | Contact Map | 0.378 |
| 1twfI | 1 | 0.3784 | 87.3 | 0.912 | Contact Map | 0.656 |
| 1vq8Z | 1 | 0.5045 | 86.9 | 0.913 | Contact Map | 0.437 |
| 3ttcA | 1 | 0.9459 | 86.9 | 0.913 | Contact Map | 0.163 |
| 1pftA | 1 | 0.4144 | 86.9 | 0.913 | Contact Map | 0.173 |
Sequence Conservation (Image Generated using WebLogo v3)