| UniProt: | P0AFE4 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12091 | ||
| Length: | 100 (99) | ||
| Sequences: | 2536 | ||
| Seq/Len: | 25.62 |
| NUOK
Paralog alert: 0.08 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 3_P | 6_H | 3.508 | 1.00 | |
| 21_G | 34_G | 3.38 | 1.00 | |
| 89_N | 94_S | 2.32 | 1.00 | |
| 27_N | 90_L | 2.064 | 1.00 | |
| 4_L | 52_Y | 2.029 | 1.00 | |
| 22_L | 31_M | 1.981 | 1.00 | |
| 18_G | 37_I | 1.914 | 1.00 | |
| 40_N | 66_I | 1.733 | 1.00 | |
| 20_T | 24_I | 1.716 | 1.00 | |
| 2_I | 6_H | 1.707 | 1.00 | |
| 58_G | 61_M | 1.689 | 1.00 | |
| 23_V | 49_A | 1.404 | 0.99 | |
| 21_G | 25_R | 1.345 | 0.99 | |
| 15_F | 41_A | 1.329 | 0.99 | |
| 39_I | 69_A | 1.311 | 0.99 | |
| 8_L | 12_A | 1.303 | 0.99 | |
| 42_S | 45_A | 1.3 | 0.99 | |
| 46_F | 58_G | 1.3 | 0.99 | |
| 18_G | 72_E | 1.256 | 0.99 | |
| 5_Q | 9_I | 1.254 | 0.99 | |
| 75_I | 78_A | 1.236 | 0.98 | |
| 50_G | 60_V | 1.23 | 0.98 | |
| 83_L | 95_V | 1.221 | 0.98 | |
| 15_F | 38_M | 1.217 | 0.98 | |
| 2_I | 5_Q | 1.214 | 0.98 | |
| 69_A | 74_S | 1.17 | 0.97 | |
| 5_Q | 88_Q | 1.145 | 0.97 | |
| 43_A | 65_A | 1.137 | 0.97 | |
| 10_L | 15_F | 1.12 | 0.96 | |
| 25_R | 30_F | 1.117 | 0.96 | |
| 41_A | 72_E | 1.115 | 0.96 | |
| 14_L | 44_L | 1.092 | 0.96 | |
| 91_N | 94_S | 1.076 | 0.95 | |
| 19_L | 59_Q | 1.057 | 0.95 | |
| 23_V | 59_Q | 1.045 | 0.94 | |
| 22_L | 34_G | 1.037 | 0.94 | |
| 35_L | 49_A | 1.031 | 0.94 | |
| 32_L | 45_A | 1.031 | 0.94 | |
| 18_G | 41_A | 1.025 | 0.93 | |
| 21_G | 70_A | 1.018 | 0.93 | |
| 43_A | 66_I | 1.012 | 0.93 | |
| 7_G | 48_V | 1.008 | 0.93 | |
| 82_Q | 85_R | 1.003 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3rkoK | 2 | 1 | 99.8 | 0.078 | Contact Map | 0.497 |
| 4he8K | 2 | 0.95 | 99.8 | 0.13 | Contact Map | 0.623 |
| 3rkoL | 2 | 0.96 | 5 | 0.899 | Contact Map | 0.609 |
| 3rkoN | 2 | 0.97 | 4.2 | 0.903 | Contact Map | 0.716 |
| 3rkoM | 2 | 1 | 3.9 | 0.905 | Contact Map | 0.661 |
| 4he8L | 2 | 0.96 | 3.7 | 0.906 | Contact Map | 0.636 |
| 4he8N | 2 | 0.93 | 1.8 | 0.92 | Contact Map | 0.658 |
| 4he8M | 2 | 0.96 | 1.3 | 0.926 | Contact Map | 0.662 |
| 3nt8A | 2 | 0.44 | 0.9 | 0.934 | Contact Map | 0.043 |
| 2kluA | 1 | 0.49 | 0.7 | 0.938 | Contact Map | 0.039 |
Sequence Conservation (Image Generated using WebLogo v3)