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OPENSEQ.org
YJET - Uncharacterized protein YjeT
UniProt: P0AF73 Sequence
 Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG12482
Length: 65 (65)
Sequences: 185
Seq/Len: 2.85
YJET
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
21_M 50_V 2.59 1.00
28_K 39_D 2.257 1.00
40_N 44_R 1.824 0.99
19_G 49_L 1.776 0.99
10_A 57_Y 1.683 0.98
41_I 44_R 1.657 0.98
14_V 40_N 1.545 0.96
47_G 55_V 1.486 0.95
48_G 52_A 1.453 0.94
42_L 46_G 1.451 0.94
13_L 20_P 1.436 0.94
19_G 27_W 1.415 0.93
8_A 12_V 1.379 0.92
29_K 33_A 1.37 0.91
10_A 54_V 1.363 0.91
8_A 11_L 1.325 0.89
18_L 50_V 1.304 0.88
14_V 36_N 1.298 0.88
32_S 35_T 1.191 0.81
11_L 57_Y 1.185 0.81
27_W 31_I 1.182 0.81
10_A 20_P 1.178 0.80
54_V 57_Y 1.112 0.75
11_L 28_K 1.106 0.74
31_I 44_R 1.096 0.73
20_P 27_W 1.081 0.72
23_Y 34_M 1.052 0.69
20_P 53_G 1.012 0.64
20_P 49_L 1.008 0.64
19_G 47_G 1 0.63
55_V 59_M 1 0.63
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
1yewA30.98464.10.902Contact Map0.091
3rfrA30.98463.90.903Contact Map0.167
2fzpA10.338530.909Contact Map0
3kg2A412.90.909Contact Map0.15
1jb0B10.95382.20.914Contact Map0.139
2j7aC60.49232.10.916Contact Map0.292
2e84A10.41541.60.921Contact Map
2ih3C10.72311.30.925Contact Map0.003
2zwaA20.92311.30.926Contact Map0.186
2zs0C10.55381.30.926Contact Map0.409
Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.
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