| UniProt: | P0AEQ1 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12952 | ||
| Length: | 134 (133) | ||
| Sequences: | 1019 | ||
| Seq/Len: | 7.66 |
| GLCG
Paralog alert: 0.30 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 22_E | 25_K | 3.592 | 1.00 | |
| 16_I | 43_A | 3.383 | 1.00 | |
| 33_A | 58_S | 3.157 | 1.00 | |
| 13_S | 45_S | 2.553 | 1.00 | |
| 33_A | 41_L | 2.409 | 1.00 | |
| 30_V | 124_V | 2.193 | 1.00 | |
| 22_E | 123_Q | 2.166 | 1.00 | |
| 31_S | 44_L | 2.138 | 1.00 | |
| 15_I | 111_V | 1.962 | 1.00 | |
| 13_S | 20_Q | 1.932 | 1.00 | |
| 7_L | 42_L | 1.867 | 1.00 | |
| 73_K | 122_A | 1.855 | 1.00 | |
| 33_A | 44_L | 1.757 | 1.00 | |
| 22_E | 26_N | 1.675 | 1.00 | |
| 126_K | 130_A | 1.631 | 1.00 | |
| 116_L | 120_Q | 1.608 | 1.00 | |
| 41_L | 44_L | 1.591 | 1.00 | |
| 71_E | 100_P | 1.568 | 1.00 | |
| 15_I | 128_A | 1.565 | 1.00 | |
| 35_A | 110_A | 1.543 | 1.00 | |
| 41_L | 59_Q | 1.513 | 1.00 | |
| 113_V | 125_A | 1.51 | 0.99 | |
| 95_L | 118_G | 1.503 | 0.99 | |
| 19_G | 111_V | 1.473 | 0.99 | |
| 31_S | 54_A | 1.438 | 0.99 | |
| 33_A | 59_Q | 1.413 | 0.99 | |
| 57_I | 114_S | 1.394 | 0.99 | |
| 101_V | 129_A | 1.392 | 0.99 | |
| 60_E | 91_L | 1.391 | 0.99 | |
| 99_V | 122_A | 1.389 | 0.99 | |
| 26_N | 123_Q | 1.385 | 0.99 | |
| 19_G | 128_A | 1.382 | 0.99 | |
| 15_I | 132_L | 1.355 | 0.99 | |
| 53_I | 68_G | 1.311 | 0.98 | |
| 24_Q | 47_M | 1.304 | 0.98 | |
| 20_Q | 32_I | 1.299 | 0.98 | |
| 63_R | 67_L | 1.297 | 0.98 | |
| 49_D | 106_Q | 1.291 | 0.98 | |
| 15_I | 101_V | 1.286 | 0.98 | |
| 31_S | 50_C | 1.276 | 0.98 | |
| 17_A | 21_E | 1.27 | 0.98 | |
| 19_G | 32_I | 1.264 | 0.98 | |
| 72_T | 98_G | 1.257 | 0.98 | |
| 102_V | 107_I | 1.256 | 0.97 | |
| 20_Q | 45_S | 1.255 | 0.97 | |
| 96_E | 122_A | 1.253 | 0.97 | |
| 53_I | 67_L | 1.24 | 0.97 | |
| 44_L | 55_A | 1.22 | 0.97 | |
| 56_Y | 59_Q | 1.219 | 0.97 | |
| 18_A | 131_V | 1.185 | 0.96 | |
| 9_Q | 12_A | 1.173 | 0.96 | |
| 68_G | 75_Y | 1.166 | 0.96 | |
| 9_Q | 45_S | 1.121 | 0.94 | |
| 28_W | 116_L | 1.079 | 0.93 | |
| 36_D | 46_R | 1.076 | 0.92 | |
| 23_A | 30_V | 1.075 | 0.92 | |
| 12_A | 43_A | 1.074 | 0.92 | |
| 16_I | 45_S | 1.071 | 0.92 | |
| 50_C | 54_A | 1.07 | 0.92 | |
| 30_V | 115_G | 1.06 | 0.92 | |
| 23_A | 124_V | 1.051 | 0.91 | |
| 38_G | 46_R | 1.048 | 0.91 | |
| 122_A | 126_K | 1.045 | 0.91 | |
| 17_A | 45_S | 1.039 | 0.91 | |
| 21_E | 25_K | 1.031 | 0.90 | |
| 20_Q | 24_Q | 1.029 | 0.90 | |
| 12_A | 34_V | 1.017 | 0.89 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2a2lA | 4 | 1 | 100 | 0.126 | Contact Map | 0.868 |
| 3fpwA | 1 | 0.9925 | 100 | 0.132 | Contact Map | 0.706 |
| 3mq0A | 2 | 0.9776 | 77.4 | 0.886 | Contact Map | 0.246 |
| 2o0yA | 4 | 0.9776 | 76.4 | 0.887 | Contact Map | 0.29 |
| 1yspA | 1 | 0.903 | 72.5 | 0.891 | Contact Map | 0.286 |
| 3obfA | 2 | 0.903 | 69 | 0.893 | Contact Map | 0.273 |
| 2g7uA | 4 | 0.9552 | 66.8 | 0.895 | Contact Map | 0.249 |
| 2o99A | 4 | 0.9179 | 63.3 | 0.897 | Contact Map | 0.343 |
| 2ia2A | 4 | 0.9552 | 63.2 | 0.897 | Contact Map | 0.309 |
| 1iruM | 2 | 0.3582 | 57.9 | 0.901 | Contact Map | 0.166 |
Sequence Conservation (Image Generated using WebLogo v3)