| UniProt: | P0AE48 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12516 | ||
| Length: | 113 (111) | ||
| Sequences: | 483 | ||
| Seq/Len: | 4.35 |
| YTFP
Paralog alert: 0.02 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 10_R | 107_D | 4.322 | 1.00 | |
| 55_V | 88_A | 2.904 | 1.00 | |
| 4_F | 53_G | 2.759 | 1.00 | |
| 15_N | 69_L | 2.678 | 1.00 | |
| 3_I | 66_L | 2.081 | 1.00 | |
| 23_Q | 57_R | 1.918 | 1.00 | |
| 69_L | 89_W | 1.915 | 1.00 | |
| 30_I | 44_A | 1.873 | 1.00 | |
| 11_H | 54_E | 1.863 | 1.00 | |
| 63_L | 78_R | 1.842 | 1.00 | |
| 10_R | 109_L | 1.789 | 1.00 | |
| 67_D | 70_R | 1.67 | 0.99 | |
| 72_R | 77_A | 1.594 | 0.99 | |
| 3_I | 15_N | 1.594 | 0.99 | |
| 37_S | 108_W | 1.543 | 0.98 | |
| 36_Y | 106_G | 1.527 | 0.98 | |
| 83_T | 86_G | 1.512 | 0.98 | |
| 3_I | 69_L | 1.503 | 0.98 | |
| 41_Y | 75_E | 1.495 | 0.98 | |
| 39_G | 108_W | 1.44 | 0.97 | |
| 59_D | 62_T | 1.433 | 0.97 | |
| 83_T | 88_A | 1.391 | 0.96 | |
| 78_R | 89_W | 1.374 | 0.96 | |
| 26_G | 56_Y | 1.348 | 0.95 | |
| 19_M | 22_A | 1.34 | 0.95 | |
| 15_N | 108_W | 1.295 | 0.94 | |
| 32_N | 43_G | 1.284 | 0.94 | |
| 13_Q | 108_W | 1.265 | 0.93 | |
| 24_L | 56_Y | 1.264 | 0.93 | |
| 51_V | 90_M | 1.249 | 0.92 | |
| 41_Y | 71_T | 1.222 | 0.91 | |
| 6_Y | 9_L | 1.16 | 0.88 | |
| 51_V | 71_T | 1.157 | 0.88 | |
| 80_L | 87_S | 1.116 | 0.85 | |
| 31_D | 48_N | 1.091 | 0.84 | |
| 22_A | 56_Y | 1.089 | 0.83 | |
| 97_V | 103_I | 1.079 | 0.83 | |
| 28_F | 86_G | 1.069 | 0.82 | |
| 68_A | 71_T | 1.063 | 0.81 | |
| 44_A | 92_V | 1.047 | 0.80 | |
| 32_N | 51_V | 1.044 | 0.80 | |
| 11_H | 24_L | 1.033 | 0.79 | |
| 16_S | 54_E | 1.02 | 0.77 | |
| 75_E | 93_Y | 1.018 | 0.77 | |
| 3_I | 72_R | 1.018 | 0.77 | |
| 12_K | 47_G | 1.014 | 0.77 | |
| 36_Y | 45_V | 1 | 0.75 | |
| 38_L | 43_G | 1 | 0.75 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1xhsA | 1 | 1 | 100 | 0.213 | Contact Map | 0.331 |
| 1v30A | 1 | 0.9735 | 100 | 0.231 | Contact Map | 0.533 |
| 2qikA | 1 | 0.9027 | 99.9 | 0.307 | Contact Map | 0.573 |
| 1vkbA | 1 | 0.9823 | 99.9 | 0.313 | Contact Map | 0.533 |
| 4gysA | 2 | 0 | 99.9 | 0.357 | Contact Map | |
| 4issA | 2 | 0.9735 | 99.8 | 0.411 | Contact Map | 0.386 |
| 2g0qA | 1 | 0.9558 | 99.8 | 0.433 | Contact Map | 0.393 |
| 2jqvA | 1 | 0.9558 | 99.8 | 0.468 | Contact Map | 0.296 |
| 3judA | 1 | 0.9823 | 99.7 | 0.478 | Contact Map | 0.533 |
| 3cryA | 2 | 0.9735 | 99.6 | 0.54 | Contact Map | 0.451 |
Sequence Conservation (Image Generated using WebLogo v3)