| UniProt: | P0ADZ7 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11096 | ||
| Length: | 110 (108) | ||
| Sequences: | 1086 | ||
| Seq/Len: | 10.06 |
| YAJC
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 85_L | 91_V | 3.084 | 1.00 | |
| 24_I | 28_V | 2.995 | 1.00 | |
| 51_K | 55_S | 2.652 | 1.00 | |
| 68_L | 91_V | 2.58 | 1.00 | |
| 48_E | 51_K | 2.549 | 1.00 | |
| 34_F | 38_I | 2.447 | 1.00 | |
| 49_H | 53_M | 2.397 | 1.00 | |
| 44_K | 48_E | 2.181 | 1.00 | |
| 68_L | 85_L | 1.906 | 1.00 | |
| 31_G | 39_L | 1.799 | 1.00 | |
| 51_K | 54_D | 1.771 | 1.00 | |
| 69_V | 94_K | 1.762 | 1.00 | |
| 50_K | 54_D | 1.719 | 1.00 | |
| 56_I | 72_V | 1.715 | 1.00 | |
| 45_R | 48_E | 1.642 | 1.00 | |
| 62_V | 83_I | 1.637 | 1.00 | |
| 43_Q | 47_K | 1.613 | 1.00 | |
| 33_I | 37_M | 1.567 | 1.00 | |
| 86_N | 89_T | 1.562 | 1.00 | |
| 65_N | 97_F | 1.557 | 1.00 | |
| 5_I | 8_A | 1.527 | 1.00 | |
| 75_V | 95_R | 1.52 | 1.00 | |
| 27_L | 31_G | 1.49 | 1.00 | |
| 39_L | 43_Q | 1.488 | 1.00 | |
| 29_V | 32_L | 1.485 | 1.00 | |
| 27_L | 30_F | 1.458 | 1.00 | |
| 56_I | 98_V | 1.454 | 1.00 | |
| 21_M | 26_M | 1.44 | 1.00 | |
| 82_A | 90_E | 1.436 | 1.00 | |
| 40_R | 44_K | 1.417 | 1.00 | |
| 30_F | 34_F | 1.359 | 0.99 | |
| 52_L | 101_V | 1.355 | 0.99 | |
| 26_M | 29_V | 1.346 | 0.99 | |
| 4_F | 8_A | 1.303 | 0.99 | |
| 38_I | 43_Q | 1.3 | 0.99 | |
| 46_T | 50_K | 1.264 | 0.99 | |
| 94_K | 97_F | 1.243 | 0.98 | |
| 85_L | 89_T | 1.223 | 0.98 | |
| 69_V | 80_Y | 1.218 | 0.98 | |
| 23_L | 27_L | 1.192 | 0.98 | |
| 4_F | 7_D | 1.176 | 0.98 | |
| 85_L | 93_I | 1.174 | 0.98 | |
| 6_S | 9_V | 1.172 | 0.98 | |
| 84_A | 88_T | 1.166 | 0.97 | |
| 52_L | 55_S | 1.09 | 0.96 | |
| 82_A | 92_V | 1.089 | 0.96 | |
| 73_T | 90_E | 1.081 | 0.95 | |
| 81_I | 98_V | 1.063 | 0.95 | |
| 23_L | 29_V | 1.059 | 0.95 | |
| 43_Q | 46_T | 1.05 | 0.94 | |
| 5_I | 9_V | 1.03 | 0.94 | |
| 4_F | 9_V | 1.017 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2rddB | 1 | 0.3364 | 99.3 | 0.626 | Contact Map | 0.201 |
| 4hczA | 2 | 0.4818 | 62.3 | 0.892 | Contact Map | 0.672 |
| 4l5gA | 2 | 0.5364 | 52.2 | 0.898 | Contact Map | 0.357 |
| 4hw9A | 7 | 0.8 | 47.5 | 0.901 | Contact Map | 0.738 |
| 3udcA | 7 | 0.8273 | 46.7 | 0.902 | Contact Map | 0.477 |
| 2vv5A | 7 | 0.8 | 42.2 | 0.904 | Contact Map | 0.682 |
| 1vq8T | 1 | 0.6636 | 38.8 | 0.906 | Contact Map | 0.427 |
| 2k4kA | 1 | 0.4727 | 37.5 | 0.907 | Contact Map | 0.227 |
| 2jwaA | 2 | 0.3636 | 29.6 | 0.912 | Contact Map | 0.323 |
| 3lrxA | 6 | 0.4909 | 29.5 | 0.912 | Contact Map | 0.06 |
Sequence Conservation (Image Generated using WebLogo v3)