| UniProt: | P0ADY7 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10877 | ||
| Length: | 136 (135) | ||
| Sequences: | 1081 | ||
| Seq/Len: | 8.01 |
| RL16
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 26_V | 32_G | 3.518 | 1.00 | |
| 110_E | 114_R | 3.179 | 1.00 | |
| 117_F | 130_F | 2.903 | 1.00 | |
| 35_A | 126_I | 2.698 | 1.00 | |
| 109_P | 112_L | 2.591 | 1.00 | |
| 115_E | 118_K | 2.361 | 1.00 | |
| 30_S | 106_D | 2.321 | 1.00 | |
| 41_L | 67_V | 2.249 | 1.00 | |
| 57_V | 105_M | 2.233 | 1.00 | |
| 73_I | 91_Y | 2.221 | 1.00 | |
| 121_A | 128_T | 2.188 | 1.00 | |
| 53_M | 63_I | 2.096 | 1.00 | |
| 110_E | 132_T | 2.052 | 1.00 | |
| 40_R | 95_L | 2.037 | 1.00 | |
| 37_G | 127_K | 1.965 | 1.00 | |
| 49_A | 124_L | 1.964 | 1.00 | |
| 71_K | 95_L | 1.84 | 1.00 | |
| 41_L | 126_I | 1.831 | 1.00 | |
| 31_F | 130_F | 1.796 | 1.00 | |
| 15_G | 71_K | 1.773 | 1.00 | |
| 28_F | 66_R | 1.731 | 1.00 | |
| 32_G | 131_V | 1.639 | 1.00 | |
| 53_M | 105_M | 1.631 | 1.00 | |
| 56_A | 112_L | 1.63 | 1.00 | |
| 33_L | 121_A | 1.591 | 1.00 | |
| 114_R | 130_F | 1.522 | 1.00 | |
| 34_K | 131_V | 1.486 | 0.99 | |
| 49_A | 103_Y | 1.481 | 0.99 | |
| 42_T | 45_Q | 1.473 | 0.99 | |
| 63_I | 105_M | 1.467 | 0.99 | |
| 34_K | 129_T | 1.464 | 0.99 | |
| 3_Q | 43_A | 1.449 | 0.99 | |
| 41_L | 102_L | 1.433 | 0.99 | |
| 75_E | 90_E | 1.386 | 0.99 | |
| 57_V | 112_L | 1.355 | 0.99 | |
| 76_K | 80_V | 1.353 | 0.99 | |
| 74_T | 89_V | 1.334 | 0.99 | |
| 12_M | 72_P | 1.314 | 0.98 | |
| 53_M | 120_A | 1.27 | 0.98 | |
| 54_T | 63_I | 1.254 | 0.98 | |
| 7_T | 12_M | 1.25 | 0.98 | |
| 57_V | 60_Q | 1.231 | 0.97 | |
| 32_G | 101_V | 1.227 | 0.97 | |
| 14_K | 40_R | 1.223 | 0.97 | |
| 43_A | 91_Y | 1.2 | 0.97 | |
| 81_R | 92_W | 1.198 | 0.97 | |
| 73_I | 95_L | 1.179 | 0.96 | |
| 21_A | 100_K | 1.172 | 0.96 | |
| 101_V | 131_V | 1.166 | 0.96 | |
| 118_K | 122_A | 1.15 | 0.96 | |
| 23_G | 27_S | 1.129 | 0.95 | |
| 67_V | 126_I | 1.126 | 0.95 | |
| 28_F | 44_R | 1.121 | 0.95 | |
| 67_V | 102_L | 1.113 | 0.94 | |
| 17_N | 38_R | 1.106 | 0.94 | |
| 7_T | 92_W | 1.101 | 0.94 | |
| 30_S | 133_K | 1.092 | 0.94 | |
| 47_E | 50_R | 1.072 | 0.93 | |
| 56_A | 115_E | 1.067 | 0.93 | |
| 26_V | 131_V | 1.056 | 0.92 | |
| 5_K | 92_W | 1.053 | 0.92 | |
| 27_S | 66_R | 1.052 | 0.92 | |
| 77_P | 80_V | 1.045 | 0.92 | |
| 103_Y | 124_L | 1.038 | 0.91 | |
| 40_R | 129_T | 1.035 | 0.91 | |
| 55_R | 116_A | 1.032 | 0.91 | |
| 17_N | 71_K | 1.023 | 0.90 | |
| 9_F | 12_M | 1.021 | 0.90 | |
| 15_G | 73_I | 1.017 | 0.90 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2zjrJ | 1 | 1 | 100 | 0.095 | Contact Map | 0.66 |
| 3bboO | 1 | 0.9853 | 100 | 0.098 | Contact Map | 0.565 |
| 4kixM | 1 | 1 | 100 | 0.108 | Contact Map | 0.709 |
| 2ftcI | 1 | 0.8382 | 100 | 0.265 | Contact Map | 0.002 |
| 1ffkF | 1 | 0.9853 | 100 | 0.331 | Contact Map | 0.091 |
| 2pa2A | 2 | 0.8676 | 100 | 0.342 | Contact Map | 0.652 |
| 1vq8H | 1 | 1 | 100 | 0.345 | Contact Map | 0.634 |
| 3j3bI | 1 | 0.9926 | 100 | 0.35 | Contact Map | 0.543 |
| 4a17H | 1 | 1 | 100 | 0.35 | Contact Map | 0.498 |
| 3j0lJ | 1 | 1 | 100 | 0.351 | Contact Map | 0.203 |
Sequence Conservation (Image Generated using WebLogo v3)