| UniProt: | P0ADX9 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10343 | ||
| Length: | 198 (181) | ||
| Sequences: | 1860 | ||
| Seq/Len: | 10.28 |
| RSMD
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 67_G | 80_L | 3.727 | 1.00 | |
| 14_I | 68_L | 3.385 | 1.00 | |
| 68_L | 95_L | 2.896 | 1.00 | |
| 40_R | 65_A | 2.689 | 1.00 | |
| 148_L | 152_A | 2.486 | 1.00 | |
| 43_L | 184_Y | 2.453 | 1.00 | |
| 56_C | 66_L | 2.403 | 1.00 | |
| 158_S | 185_R | 2.395 | 1.00 | |
| 55_Q | 77_G | 2.37 | 1.00 | |
| 25_P | 93_K | 2.319 | 1.00 | |
| 19_W | 100_A | 2.288 | 1.00 | |
| 71_L | 103_A | 2.244 | 1.00 | |
| 82_E | 88_S | 2.218 | 1.00 | |
| 79_T | 121_H | 2.198 | 1.00 | |
| 41_E | 45_N | 2.132 | 1.00 | |
| 22_R | 97_T | 2.049 | 1.00 | |
| 42_T | 179_A | 2.01 | 1.00 | |
| 173_L | 187_Y | 1.974 | 1.00 | |
| 85_R | 107_N | 1.961 | 1.00 | |
| 39_V | 182_V | 1.934 | 1.00 | |
| 61_A | 80_L | 1.859 | 1.00 | |
| 18_Q | 102_N | 1.805 | 1.00 | |
| 32_L | 87_V | 1.772 | 1.00 | |
| 71_L | 78_A | 1.759 | 1.00 | |
| 71_L | 80_L | 1.744 | 1.00 | |
| 142_L | 152_A | 1.741 | 1.00 | |
| 122_N | 149_A | 1.727 | 1.00 | |
| 46_W | 186_L | 1.709 | 1.00 | |
| 60_F | 138_T | 1.676 | 1.00 | |
| 95_L | 103_A | 1.662 | 1.00 | |
| 124_V | 152_A | 1.645 | 1.00 | |
| 13_R | 37_D | 1.635 | 1.00 | |
| 88_S | 105_V | 1.632 | 1.00 | |
| 95_L | 105_V | 1.572 | 1.00 | |
| 59_C | 81_I | 1.535 | 1.00 | |
| 77_G | 104_R | 1.53 | 1.00 | |
| 57_L | 121_H | 1.526 | 1.00 | |
| 134_L | 138_T | 1.501 | 1.00 | |
| 22_R | 99_K | 1.493 | 1.00 | |
| 66_L | 125_F | 1.429 | 1.00 | |
| 42_T | 45_N | 1.416 | 1.00 | |
| 71_L | 95_L | 1.41 | 1.00 | |
| 80_L | 103_A | 1.405 | 0.99 | |
| 176_E | 183_A | 1.405 | 0.99 | |
| 160_V | 178_V | 1.401 | 0.99 | |
| 85_R | 89_Q | 1.397 | 0.99 | |
| 108_S | 113_F | 1.394 | 0.99 | |
| 178_V | 183_A | 1.391 | 0.99 | |
| 67_G | 78_A | 1.39 | 0.99 | |
| 89_Q | 93_K | 1.388 | 0.99 | |
| 35_T | 157_E | 1.372 | 0.99 | |
| 113_F | 117_K | 1.35 | 0.99 | |
| 82_E | 87_V | 1.344 | 0.99 | |
| 43_L | 66_L | 1.342 | 0.99 | |
| 19_W | 98_L | 1.34 | 0.99 | |
| 60_F | 109_N | 1.324 | 0.99 | |
| 149_A | 152_A | 1.324 | 0.99 | |
| 173_L | 185_R | 1.318 | 0.99 | |
| 79_T | 106_V | 1.313 | 0.99 | |
| 35_T | 127_D | 1.312 | 0.99 | |
| 46_W | 184_Y | 1.295 | 0.99 | |
| 81_I | 113_F | 1.288 | 0.99 | |
| 124_V | 142_L | 1.282 | 0.99 | |
| 15_I | 41_E | 1.243 | 0.98 | |
| 39_V | 42_T | 1.239 | 0.98 | |
| 61_A | 67_G | 1.233 | 0.98 | |
| 57_L | 124_V | 1.209 | 0.98 | |
| 24_L | 94_N | 1.172 | 0.98 | |
| 153_L | 174_H | 1.16 | 0.97 | |
| 46_W | 175_R | 1.155 | 0.97 | |
| 131_R | 159_E | 1.149 | 0.97 | |
| 131_R | 161_E | 1.147 | 0.97 | |
| 51_I | 54_A | 1.138 | 0.97 | |
| 143_E | 189_R | 1.126 | 0.97 | |
| 56_C | 125_F | 1.122 | 0.97 | |
| 15_I | 37_D | 1.102 | 0.96 | |
| 172_S | 190_E | 1.082 | 0.96 | |
| 56_C | 70_A | 1.078 | 0.95 | |
| 59_C | 110_A | 1.073 | 0.95 | |
| 51_I | 123_I | 1.072 | 0.95 | |
| 140_N | 144_D | 1.07 | 0.95 | |
| 61_A | 91_L | 1.049 | 0.94 | |
| 57_L | 79_T | 1.04 | 0.94 | |
| 88_S | 107_N | 1.04 | 0.94 | |
| 88_S | 91_L | 1.03 | 0.94 | |
| 12_I | 26_V | 1.025 | 0.93 | |
| 173_L | 176_E | 1.019 | 0.93 | |
| 159_E | 181_Q | 1.011 | 0.93 | |
| 32_L | 90_Q | 1.002 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2fpoA | 6 | 1 | 100 | 0.572 | Contact Map | 0.772 |
| 1ws6A | 1 | 0.8434 | 100 | 0.574 | Contact Map | 0.733 |
| 2iftA | 2 | 0.9899 | 100 | 0.59 | Contact Map | 0.701 |
| 2fhpA | 2 | 0.9242 | 99.9 | 0.608 | Contact Map | 0.816 |
| 4dcmA | 1 | 0.9293 | 99.9 | 0.628 | Contact Map | 0.519 |
| 4bluA | 2 | 0.9192 | 99.9 | 0.646 | Contact Map | 0.304 |
| 2esrA | 2 | 0.8838 | 99.9 | 0.647 | Contact Map | 0.776 |
| 2oo3A | 1 | 0.9394 | 99.9 | 0.651 | Contact Map | 0.316 |
| 3p9nA | 1 | 0.9293 | 99.9 | 0.652 | Contact Map | 0.739 |
| 2dulA | 1 | 0.899 | 99.8 | 0.71 | Contact Map | 0.595 |
Sequence Conservation (Image Generated using WebLogo v3)