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OPENSEQ.org

YHHN - Uncharacterized membrane protein YhhN
UniProt: P0ADI9 Sequence
Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN.
EcoGene: EG12214
Length: 208 (203)
Sequences: 437
Seq/Len: 2.15

YHHN
Paralog alert: 0.10 [within 20: 0.00] - ratio of genomes with paralogs
GREMLIN Results:

Legend: The darker and larger the blue dots, the higher coevolution strength.

Residue pairs sorted by coevolution strength:
i j Scaled Score Prob
62_S 86_S 4.273 1.00
90_Y 199_H 3.009 1.00
143_V 169_F 2.798 1.00
84_F 138_M 2.677 1.00
68_L 82_A 2.478 1.00
58_G 93_Y 2.368 1.00
55_V 93_Y 2.27 1.00
175_W 191_A 2.266 1.00
31_K 69_T 2.188 1.00
80_I 84_F 2.136 1.00
61_A 85_L 1.957 0.99
58_G 205_S 1.949 0.99
32_P 70_L 1.877 0.98
34_T 196_F 1.871 0.98
69_T 79_A 1.831 0.98
55_V 58_G 1.826 0.98
31_K 79_A 1.699 0.97
51_I 205_S 1.657 0.96
80_I 180_Y 1.63 0.95
69_T 135_F 1.62 0.95
31_K 87_H 1.497 0.92
174_V 190_I 1.488 0.92
194_C 198_G 1.483 0.92
139_T 165_A 1.477 0.91
32_P 67_A 1.445 0.90
144_W 205_S 1.442 0.90
51_I 93_Y 1.404 0.88
69_T 87_H 1.377 0.87
38_L 177_G 1.368 0.86
39_L 63_L 1.361 0.86
135_F 172_N 1.351 0.86
79_A 87_H 1.344 0.85
118_L 133_C 1.338 0.85
136_I 139_T 1.308 0.83
88_L 92_I 1.308 0.83
64_L 82_A 1.302 0.83
76_L 172_N 1.286 0.81
28_W 70_L 1.285 0.81
61_A 191_A 1.277 0.81
161_A 205_S 1.267 0.80
54_L 204_R 1.257 0.79
168_L 172_N 1.238 0.78
80_I 139_T 1.223 0.77
139_T 199_H 1.212 0.76
87_H 139_T 1.206 0.75
135_F 168_L 1.203 0.75
117_L 173_F 1.2 0.75
79_A 172_N 1.2 0.75
34_T 192_A 1.196 0.74
76_L 80_I 1.196 0.74
60_C 64_L 1.187 0.74
116_L 119_A 1.182 0.73
142_M 165_A 1.169 0.72
15_S 30_F 1.166 0.72
178_S 187_D 1.142 0.70
142_M 180_Y 1.142 0.70
54_L 89_L 1.137 0.69
80_I 87_H 1.131 0.68
80_I 172_N 1.116 0.67
38_L 175_W 1.113 0.67
180_Y 199_H 1.11 0.66
145_L 148_E 1.1 0.65
79_A 135_F 1.097 0.65
170_I 194_C 1.095 0.65
53_Y 193_A 1.085 0.64
135_F 180_Y 1.085 0.64
196_F 205_S 1.085 0.64
69_T 172_N 1.082 0.63
82_A 87_H 1.08 0.63
167_L 194_C 1.078 0.63
34_T 199_H 1.077 0.63
15_S 128_Y 1.077 0.63
76_L 139_T 1.072 0.62
86_S 138_M 1.071 0.62
89_L 92_I 1.066 0.62
194_C 199_H 1.057 0.61
79_A 168_L 1.055 0.61
83_F 135_F 1.054 0.60
79_A 139_T 1.039 0.59
87_H 91_T 1.035 0.58
164_G 202_I 1.026 0.57
65_G 180_Y 1.024 0.57
69_T 76_L 1.024 0.57
12_A 30_F 1.023 0.57
169_F 198_G 1.017 0.56
62_S 165_A 1.009 0.55
35_L 192_A 1.005 0.55
38_L 192_A 1.005 0.55
88_L 163_V 1.004 0.55
7_A 11_S 1.001 0.55
65_G 83_F 1.001 0.55
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
HHsearch Results:
PDB Chains Cov P(%) HHΔ   Acc
3pfzA10.25480.80.973Contact Map0
4he8H20.28850.70.974Contact Map0.923
3wdoA10.98560.60.975Contact Map0.032
1sghB10.06250.60.976Contact Map0
2fmaA10.09620.50.976Contact Map0
2kr6A10.32690.50.976Contact Map0.035
2ls2A10.09130.50.977Contact Map0.18
4i7zE10.15380.50.977Contact Map0.15
1tzsX10.11060.40.978Contact Map
2ksfA10.43270.40.979Contact Map0.243

Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width.

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