| UniProt: | P0ACG8 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12929 | ||
| Length: | 133 (126) | ||
| Sequences: | 720 | ||
| Seq/Len: | 5.71 |
| HSLR
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 67_I | 86_E | 3.145 | 1.00 | |
| 76_R | 80_E | 2.654 | 1.00 | |
| 69_K | 86_E | 2.647 | 1.00 | |
| 20_F | 66_V | 2.42 | 1.00 | |
| 72_T | 84_L | 2.113 | 1.00 | |
| 21_Y | 57_L | 2.1 | 1.00 | |
| 54_T | 65_T | 1.974 | 1.00 | |
| 67_I | 88_T | 1.939 | 1.00 | |
| 114_R | 117_D | 1.907 | 1.00 | |
| 81_A | 85_Y | 1.811 | 1.00 | |
| 117_D | 120_E | 1.787 | 1.00 | |
| 39_N | 53_A | 1.705 | 1.00 | |
| 72_T | 76_R | 1.703 | 1.00 | |
| 51_L | 71_I | 1.703 | 1.00 | |
| 37_H | 42_R | 1.694 | 1.00 | |
| 54_T | 67_I | 1.683 | 1.00 | |
| 58_R | 63_E | 1.653 | 1.00 | |
| 123_D | 126_R | 1.631 | 0.99 | |
| 82_A | 85_Y | 1.602 | 0.99 | |
| 117_D | 125_L | 1.6 | 0.99 | |
| 80_E | 83_L | 1.583 | 0.99 | |
| 100_L | 104_L | 1.559 | 0.99 | |
| 55_L | 68_V | 1.534 | 0.99 | |
| 14_W | 18_A | 1.531 | 0.99 | |
| 77_P | 80_E | 1.489 | 0.99 | |
| 93_E | 97_K | 1.478 | 0.99 | |
| 100_L | 103_K | 1.429 | 0.98 | |
| 32_E | 45_P | 1.394 | 0.98 | |
| 38_Y | 53_A | 1.382 | 0.98 | |
| 45_P | 115_R | 1.38 | 0.98 | |
| 86_E | 89_A | 1.362 | 0.98 | |
| 70_A | 83_L | 1.356 | 0.97 | |
| 59_Q | 64_R | 1.328 | 0.97 | |
| 88_T | 91_S | 1.297 | 0.96 | |
| 120_E | 124_L | 1.291 | 0.96 | |
| 112_P | 117_D | 1.262 | 0.96 | |
| 50_E | 53_A | 1.244 | 0.95 | |
| 49_V | 68_V | 1.241 | 0.95 | |
| 25_A | 29_E | 1.229 | 0.95 | |
| 16_W | 44_K | 1.222 | 0.95 | |
| 109_M | 112_P | 1.22 | 0.94 | |
| 18_A | 84_L | 1.217 | 0.94 | |
| 70_A | 84_L | 1.192 | 0.94 | |
| 118_K | 122_R | 1.169 | 0.93 | |
| 21_Y | 59_Q | 1.167 | 0.93 | |
| 81_A | 84_L | 1.152 | 0.92 | |
| 21_Y | 30_M | 1.106 | 0.90 | |
| 39_N | 43_S | 1.099 | 0.89 | |
| 18_A | 85_Y | 1.091 | 0.89 | |
| 15_L | 21_Y | 1.061 | 0.87 | |
| 123_D | 127_F | 1.044 | 0.86 | |
| 97_K | 100_L | 1.042 | 0.86 | |
| 87_E | 91_S | 1.037 | 0.85 | |
| 49_V | 71_I | 1.036 | 0.85 | |
| 65_T | 90_E | 1.026 | 0.84 | |
| 14_W | 85_Y | 1.008 | 0.83 | |
| 94_K | 97_K | 1.006 | 0.83 | |
| 38_Y | 55_L | 1.005 | 0.83 | |
| 119_K | 123_D | 1.003 | 0.83 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1dm9A | 2 | 1 | 100 | 0.371 | Contact Map | 0.871 |
| 2k6pA | 1 | 0.6917 | 99.5 | 0.684 | Contact Map | 0.51 |
| 4bpeD | 1 | 0.609 | 98.9 | 0.769 | Contact Map | 0.46 |
| 3iz6C | 1 | 0.6692 | 98.8 | 0.778 | Contact Map | 0.019 |
| 3u5cJ | 1 | 0.6992 | 98.7 | 0.784 | Contact Map | 0.315 |
| 3bbnD | 1 | 0.812 | 98.6 | 0.79 | Contact Map | 0.402 |
| 3zey6 | 1 | 0.6617 | 98.6 | 0.791 | Contact Map | 0.445 |
| 4kiyD | 1 | 0.8045 | 98.6 | 0.792 | Contact Map | 0.302 |
| 2cqjA | 1 | 0.5038 | 98.5 | 0.798 | Contact Map | 0.454 |
| 1p9kA | 1 | 0.4962 | 98.4 | 0.801 | Contact Map | 0.353 |
Sequence Conservation (Image Generated using WebLogo v3)