| UniProt: | P0AC28 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11158 | ||
| Length: | 182 (182) | ||
| Sequences: | 2160 | ||
| Seq/Len: | 11.87 |
| YGFA
Paralog alert: 0.02 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 2_I | 119_A | 2.648 | 1.00 | |
| 42_S | 49_T | 2.618 | 1.00 | |
| 36_T | 64_Y | 2.592 | 1.00 | |
| 41_L | 65_L | 2.565 | 1.00 | |
| 38_A | 78_F | 2.557 | 1.00 | |
| 150_G | 170_L | 2.538 | 1.00 | |
| 125_Q | 163_V | 2.516 | 1.00 | |
| 38_A | 113_L | 2.488 | 1.00 | |
| 62_R | 80_N | 2.454 | 1.00 | |
| 36_T | 62_R | 2.405 | 1.00 | |
| 154_D | 177_S | 2.374 | 1.00 | |
| 121_D | 125_Q | 2.349 | 1.00 | |
| 76_L | 137_T | 2.338 | 1.00 | |
| 117_L | 120_F | 2.153 | 1.00 | |
| 90_N | 96_E | 2.145 | 1.00 | |
| 64_Y | 110_L | 2.01 | 1.00 | |
| 21_A | 47_L | 1.981 | 1.00 | |
| 25_M | 114_I | 1.907 | 1.00 | |
| 49_T | 151_Y | 1.902 | 1.00 | |
| 34_A | 61_K | 1.858 | 1.00 | |
| 56_L | 63_V | 1.817 | 1.00 | |
| 148_P | 171_P | 1.809 | 1.00 | |
| 39_V | 53_I | 1.792 | 1.00 | |
| 31_V | 56_L | 1.774 | 1.00 | |
| 55_Q | 59_A | 1.747 | 1.00 | |
| 18_G | 153_H | 1.744 | 1.00 | |
| 122_E | 178_K | 1.739 | 1.00 | |
| 10_T | 13_Q | 1.681 | 1.00 | |
| 90_N | 94_I | 1.636 | 1.00 | |
| 36_T | 110_L | 1.632 | 1.00 | |
| 154_D | 176_P | 1.595 | 1.00 | |
| 89_M | 95_H | 1.591 | 1.00 | |
| 24_R | 178_K | 1.529 | 1.00 | |
| 78_F | 137_T | 1.521 | 1.00 | |
| 3_R | 118_V | 1.504 | 1.00 | |
| 152_A | 156_Q | 1.485 | 1.00 | |
| 65_L | 81_Y | 1.471 | 1.00 | |
| 38_A | 137_T | 1.465 | 1.00 | |
| 14_Q | 18_G | 1.463 | 1.00 | |
| 31_V | 59_A | 1.444 | 1.00 | |
| 122_E | 157_L | 1.429 | 1.00 | |
| 147_Q | 172_A | 1.42 | 1.00 | |
| 6_R | 129_M | 1.416 | 1.00 | |
| 120_F | 150_G | 1.407 | 0.99 | |
| 174_V | 179_V | 1.401 | 0.99 | |
| 154_D | 178_K | 1.381 | 0.99 | |
| 3_R | 129_M | 1.379 | 0.99 | |
| 25_M | 52_L | 1.377 | 0.99 | |
| 138_L | 148_P | 1.375 | 0.99 | |
| 1_M | 5_R | 1.374 | 0.99 | |
| 7_R | 45_G | 1.362 | 0.99 | |
| 13_Q | 17_M | 1.353 | 0.99 | |
| 67_V | 79_L | 1.351 | 0.99 | |
| 14_Q | 153_H | 1.35 | 0.99 | |
| 39_V | 114_I | 1.349 | 0.99 | |
| 149_V | 172_A | 1.326 | 0.99 | |
| 42_S | 50_Q | 1.316 | 0.99 | |
| 28_Y | 149_V | 1.312 | 0.99 | |
| 121_D | 161_L | 1.302 | 0.99 | |
| 112_V | 149_V | 1.291 | 0.99 | |
| 42_S | 48_D | 1.279 | 0.99 | |
| 118_V | 129_M | 1.264 | 0.99 | |
| 125_Q | 169_P | 1.26 | 0.99 | |
| 121_D | 160_K | 1.254 | 0.99 | |
| 119_A | 127_L | 1.237 | 0.98 | |
| 154_D | 157_L | 1.228 | 0.98 | |
| 4_Q | 8_A | 1.223 | 0.98 | |
| 22_A | 52_L | 1.219 | 0.98 | |
| 115_T | 138_L | 1.217 | 0.98 | |
| 31_V | 61_K | 1.213 | 0.98 | |
| 122_E | 159_E | 1.211 | 0.98 | |
| 69_H | 77_L | 1.206 | 0.98 | |
| 43_F | 129_M | 1.181 | 0.98 | |
| 2_I | 158_V | 1.172 | 0.98 | |
| 26_M | 55_Q | 1.162 | 0.97 | |
| 28_Y | 174_V | 1.136 | 0.97 | |
| 114_I | 151_Y | 1.124 | 0.97 | |
| 17_M | 153_H | 1.122 | 0.97 | |
| 88_V | 98_K | 1.118 | 0.96 | |
| 117_L | 157_L | 1.116 | 0.96 | |
| 81_Y | 84_Q | 1.113 | 0.96 | |
| 28_Y | 172_A | 1.1 | 0.96 | |
| 49_T | 53_I | 1.093 | 0.96 | |
| 14_Q | 45_G | 1.083 | 0.96 | |
| 38_A | 64_Y | 1.082 | 0.96 | |
| 55_Q | 58_R | 1.081 | 0.95 | |
| 117_L | 170_L | 1.079 | 0.95 | |
| 52_L | 151_Y | 1.078 | 0.95 | |
| 68_L | 133_F | 1.061 | 0.95 | |
| 115_T | 148_P | 1.048 | 0.94 | |
| 17_M | 20_Q | 1.044 | 0.94 | |
| 148_P | 170_L | 1.041 | 0.94 | |
| 7_R | 44_D | 1.038 | 0.94 | |
| 120_F | 156_Q | 1.033 | 0.94 | |
| 67_V | 96_E | 1.011 | 0.93 | |
| 48_D | 51_P | 1.008 | 0.93 | |
| 117_L | 150_G | 1.002 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2jcbA | 2 | 0.978 | 100 | 0.038 | Contact Map | 0.863 |
| 1ydmA | 3 | 0.978 | 100 | 0.043 | Contact Map | 0.831 |
| 1souA | 1 | 0.9505 | 100 | 0.062 | Contact Map | 0.666 |
| 3hy3A | 1 | 0.989 | 100 | 0.076 | Contact Map | 0.857 |
| 1wkcA | 1 | 0.9011 | 100 | 0.12 | Contact Map | 0.747 |
| 1sbqA | 2 | 0.8462 | 100 | 0.184 | Contact Map | 0.831 |
| 1z7mA | 4 | 0.8462 | 12.1 | 0.948 | Contact Map | 0.12 |
| 2gdtA | 1 | 0.4176 | 4 | 0.958 | Contact Map | 0.372 |
| 2vrnA | 2 | 0.7473 | 3.5 | 0.959 | Contact Map | 0.4 |
| 3l18A | 2 | 0.7143 | 3.3 | 0.96 | Contact Map | 0.411 |
Sequence Conservation (Image Generated using WebLogo v3)