| UniProt: | P0ABW0 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13458 | ||
| Length: | 106 (102) | ||
| Sequences: | 4372 | ||
| Seq/Len: | 42.86 |
| HCAC
Paralog alert: 0.55 [within 20: 0.08] - ratio of genomes with paralogs Cluster includes: HCAC NIRD |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 70_C | 73_T | 3.52 | 1.00 | |
| 5_Y | 96_D | 3.096 | 1.00 | |
| 43_S | 69_F | 2.725 | 1.00 | |
| 9_V | 92_V | 2.713 | 1.00 | |
| 59_T | 68_S | 2.441 | 1.00 | |
| 38_I | 85_L | 2.102 | 1.00 | |
| 40_D | 50_S | 2.099 | 1.00 | |
| 28_L | 37_A | 2.002 | 1.00 | |
| 91_H | 98_F | 1.95 | 1.00 | |
| 9_V | 35_F | 1.945 | 1.00 | |
| 89_P | 100_D | 1.872 | 1.00 | |
| 37_A | 90_V | 1.86 | 1.00 | |
| 39_N | 86_T | 1.857 | 1.00 | |
| 37_A | 99_I | 1.76 | 1.00 | |
| 59_T | 77_L | 1.755 | 1.00 | |
| 26_I | 37_A | 1.704 | 1.00 | |
| 8_P | 96_D | 1.614 | 1.00 | |
| 68_S | 78_C | 1.586 | 1.00 | |
| 40_D | 48_S | 1.585 | 1.00 | |
| 25_V | 39_N | 1.558 | 1.00 | |
| 35_F | 90_V | 1.522 | 1.00 | |
| 36_Y | 87_T | 1.496 | 1.00 | |
| 5_Y | 98_F | 1.489 | 1.00 | |
| 17_A | 27_A | 1.474 | 1.00 | |
| 93_E | 98_F | 1.438 | 1.00 | |
| 39_N | 88_Y | 1.438 | 1.00 | |
| 70_C | 77_L | 1.42 | 1.00 | |
| 61_E | 68_S | 1.401 | 0.99 | |
| 47_A | 64_L | 1.381 | 0.99 | |
| 7_C | 12_V | 1.375 | 0.99 | |
| 35_F | 97_I | 1.333 | 0.99 | |
| 8_P | 11_D | 1.309 | 0.99 | |
| 13_P | 16_E | 1.282 | 0.99 | |
| 29_F | 38_I | 1.222 | 0.98 | |
| 17_A | 54_L | 1.22 | 0.98 | |
| 3_R | 91_H | 1.203 | 0.98 | |
| 17_A | 60_V | 1.202 | 0.98 | |
| 47_A | 63_P | 1.198 | 0.98 | |
| 30_N | 35_F | 1.187 | 0.98 | |
| 92_V | 97_I | 1.169 | 0.97 | |
| 14_E | 30_N | 1.165 | 0.97 | |
| 56_D | 61_E | 1.165 | 0.97 | |
| 35_F | 92_V | 1.162 | 0.97 | |
| 9_V | 95_G | 1.145 | 0.97 | |
| 31_V | 36_Y | 1.139 | 0.97 | |
| 30_N | 33_G | 1.139 | 0.97 | |
| 7_C | 11_D | 1.127 | 0.97 | |
| 7_C | 97_I | 1.092 | 0.96 | |
| 67_A | 81_A | 1.091 | 0.96 | |
| 38_I | 87_T | 1.064 | 0.95 | |
| 45_G | 64_L | 1.055 | 0.95 | |
| 76_A | 84_P | 1.052 | 0.95 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2i7fA | 2 | 0.9906 | 100 | 0.042 | Contact Map | 0.935 |
| 1fqtA | 2 | 0.9906 | 100 | 0.048 | Contact Map | 0.88 |
| 2qpzA | 1 | 0.9528 | 99.9 | 0.057 | Contact Map | 0.896 |
| 3gceA | 1 | 0.9906 | 99.9 | 0.058 | Contact Map | 0.883 |
| 2de6D | 3 | 0.9906 | 99.9 | 0.066 | Contact Map | 0.899 |
| 3dqyA | 1 | 0.9811 | 99.9 | 0.067 | Contact Map | 0.937 |
| 1vm9A | 1 | 0.9717 | 99.9 | 0.078 | Contact Map | 0.885 |
| 3d89A | 1 | 0.9906 | 99.9 | 0.078 | Contact Map | 0.789 |
| 2jzaA | 1 | 0.9811 | 99.9 | 0.083 | Contact Map | 0.641 |
| 2de6A | 3 | 0.9906 | 99.9 | 0.088 | Contact Map | 0.846 |
Sequence Conservation (Image Generated using WebLogo v3)