| UniProt: | P0ABN1 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10224 | ||
| Length: | 122 (118) | ||
| Sequences: | 1134 | ||
| Seq/Len: | 9.61 |
| KDGL
Paralog alert: 0.07 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 80_V | 91_S | 3.575 | 1.00 | |
| 20_K | 92_G | 3.121 | 1.00 | |
| 25_A | 71_I | 2.963 | 1.00 | |
| 69_V | 72_L | 2.897 | 1.00 | |
| 26_W | 36_G | 2.47 | 1.00 | |
| 82_R | 91_S | 2.243 | 1.00 | |
| 39_V | 63_V | 2.086 | 1.00 | |
| 64_M | 108_V | 2.069 | 1.00 | |
| 23_R | 27_I | 1.933 | 1.00 | |
| 69_V | 105_A | 1.851 | 1.00 | |
| 71_I | 97_M | 1.807 | 1.00 | |
| 22_L | 100_A | 1.781 | 1.00 | |
| 52_D | 55_T | 1.773 | 1.00 | |
| 90_L | 94_A | 1.773 | 1.00 | |
| 55_T | 116_L | 1.744 | 1.00 | |
| 79_V | 94_A | 1.699 | 1.00 | |
| 46_A | 56_R | 1.631 | 1.00 | |
| 58_L | 62_S | 1.588 | 1.00 | |
| 51_V | 116_L | 1.579 | 1.00 | |
| 26_W | 37_V | 1.561 | 1.00 | |
| 35_E | 102_V | 1.514 | 1.00 | |
| 13_K | 16_G | 1.51 | 1.00 | |
| 65_L | 105_A | 1.501 | 1.00 | |
| 66_V | 102_V | 1.407 | 0.99 | |
| 17_Y | 20_K | 1.398 | 0.99 | |
| 14_A | 31_A | 1.377 | 0.99 | |
| 11_I | 34_Q | 1.375 | 0.99 | |
| 78_A | 93_R | 1.353 | 0.99 | |
| 68_I | 105_A | 1.343 | 0.99 | |
| 14_A | 18_S | 1.342 | 0.99 | |
| 66_V | 109_A | 1.334 | 0.99 | |
| 50_D | 56_R | 1.285 | 0.99 | |
| 32_F | 35_E | 1.22 | 0.98 | |
| 32_F | 67_M | 1.213 | 0.98 | |
| 31_A | 35_E | 1.207 | 0.98 | |
| 67_M | 104_I | 1.205 | 0.98 | |
| 28_N | 93_R | 1.198 | 0.98 | |
| 25_A | 32_F | 1.195 | 0.98 | |
| 71_I | 100_A | 1.189 | 0.98 | |
| 5_T | 13_K | 1.181 | 0.97 | |
| 18_S | 99_S | 1.181 | 0.97 | |
| 61_S | 108_V | 1.171 | 0.97 | |
| 24_A | 29_E | 1.167 | 0.97 | |
| 71_I | 104_I | 1.166 | 0.97 | |
| 36_G | 67_M | 1.158 | 0.97 | |
| 34_Q | 38_A | 1.155 | 0.97 | |
| 74_S | 97_M | 1.154 | 0.97 | |
| 75_A | 94_A | 1.148 | 0.97 | |
| 114_C | 118_W | 1.147 | 0.97 | |
| 74_S | 93_R | 1.144 | 0.97 | |
| 69_V | 101_A | 1.136 | 0.97 | |
| 43_V | 63_V | 1.121 | 0.96 | |
| 64_M | 104_I | 1.098 | 0.96 | |
| 42_A | 109_A | 1.098 | 0.96 | |
| 29_E | 78_A | 1.095 | 0.96 | |
| 79_V | 83_I | 1.094 | 0.96 | |
| 25_A | 97_M | 1.091 | 0.95 | |
| 15_A | 103_L | 1.078 | 0.95 | |
| 59_L | 62_S | 1.045 | 0.94 | |
| 31_A | 34_Q | 1.024 | 0.93 | |
| 83_I | 91_S | 1.02 | 0.93 | |
| 80_V | 94_A | 1.007 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3ze3A | 6 | 1 | 100 | 0.032 | Contact Map | 0.787 |
| 2wwbB | 1 | 0.4426 | 12.2 | 0.93 | Contact Map | 0.039 |
| 1rh5B | 1 | 0.4098 | 7.4 | 0.937 | Contact Map | 0.237 |
| 3mp7B | 1 | 0.4344 | 3.7 | 0.945 | Contact Map | 0.05 |
| 3tx3A | 2 | 0.9508 | 2.7 | 0.948 | Contact Map | 0.291 |
| 1pi7A | 1 | 0.2541 | 2.6 | 0.949 | Contact Map | |
| 3b8cA | 2 | 0.918 | 2.5 | 0.95 | Contact Map | 0.075 |
| 1avoB | 7 | 0.3361 | 1.8 | 0.953 | Contact Map | 0 |
| 4ldsA | 2 | 0.5164 | 1.8 | 0.953 | Contact Map | 0.189 |
| 4gn0A | 4 | 0.3934 | 1.7 | 0.954 | Contact Map | 0.089 |
Sequence Conservation (Image Generated using WebLogo v3)