| UniProt: | P0ABD8 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10275 | ||
| Length: | 156 (155) | ||
| Sequences: | 1448 | ||
| Seq/Len: | 9.34 |
| BCCP
Paralog alert: 0.08 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 24_S | 29_S | 4.739 | 1.00 | |
| 111_V | 132_S | 3.368 | 1.00 | |
| 93_R | 104_E | 3.189 | 1.00 | |
| 84_R | 149_D | 3.129 | 1.00 | |
| 104_E | 107_Q | 2.929 | 1.00 | |
| 117_I | 124_M | 2.861 | 1.00 | |
| 108_K | 134_T | 2.514 | 1.00 | |
| 22_E | 31_R | 2.383 | 1.00 | |
| 141_E | 144_Q | 2.37 | 1.00 | |
| 94_T | 142_S | 2.257 | 1.00 | |
| 110_N | 132_S | 2.241 | 1.00 | |
| 134_T | 156_E | 2.219 | 1.00 | |
| 81_H | 130_D | 2.121 | 1.00 | |
| 136_K | 156_E | 2.106 | 1.00 | |
| 137_A | 154_V | 2.08 | 1.00 | |
| 2_D | 5_K | 2.068 | 1.00 | |
| 20_E | 33_S | 1.946 | 1.00 | |
| 96_S | 99_A | 1.894 | 1.00 | |
| 14_E | 17_G | 1.882 | 1.00 | |
| 100_K | 104_E | 1.865 | 1.00 | |
| 139_L | 151_P | 1.823 | 1.00 | |
| 105_V | 137_A | 1.802 | 1.00 | |
| 107_Q | 113_D | 1.793 | 1.00 | |
| 83_V | 115_L | 1.779 | 1.00 | |
| 82_I | 154_V | 1.772 | 1.00 | |
| 85_S | 118_V | 1.709 | 1.00 | |
| 123_M | 149_D | 1.658 | 1.00 | |
| 81_H | 131_K | 1.642 | 1.00 | |
| 94_T | 101_A | 1.59 | 1.00 | |
| 13_V | 21_L | 1.573 | 1.00 | |
| 103_I | 153_V | 1.562 | 1.00 | |
| 133_G | 155_I | 1.555 | 1.00 | |
| 110_N | 113_D | 1.54 | 1.00 | |
| 13_V | 32_I | 1.469 | 1.00 | |
| 88_V | 148_F | 1.432 | 0.99 | |
| 91_F | 116_C | 1.429 | 0.99 | |
| 83_V | 155_I | 1.407 | 0.99 | |
| 82_I | 151_P | 1.36 | 0.99 | |
| 4_R | 8_K | 1.335 | 0.99 | |
| 10_I | 32_I | 1.31 | 0.99 | |
| 115_L | 153_V | 1.294 | 0.99 | |
| 116_C | 153_V | 1.259 | 0.98 | |
| 140_V | 150_E | 1.254 | 0.98 | |
| 103_I | 138_I | 1.241 | 0.98 | |
| 13_V | 123_M | 1.22 | 0.98 | |
| 123_M | 128_E | 1.184 | 0.97 | |
| 8_K | 11_E | 1.176 | 0.97 | |
| 138_I | 153_V | 1.174 | 0.97 | |
| 12_L | 30_V | 1.156 | 0.97 | |
| 1_M | 7_K | 1.143 | 0.97 | |
| 135_V | 153_V | 1.14 | 0.96 | |
| 111_V | 129_A | 1.132 | 0.96 | |
| 85_S | 125_N | 1.128 | 0.96 | |
| 10_I | 18_I | 1.127 | 0.96 | |
| 103_I | 135_V | 1.117 | 0.96 | |
| 95_P | 99_A | 1.088 | 0.95 | |
| 136_K | 154_V | 1.077 | 0.95 | |
| 22_E | 29_S | 1.068 | 0.94 | |
| 112_G | 129_A | 1.065 | 0.94 | |
| 131_K | 155_I | 1.059 | 0.94 | |
| 10_I | 13_V | 1.044 | 0.93 | |
| 147_E | 150_E | 1.041 | 0.93 | |
| 112_G | 115_L | 1.036 | 0.93 | |
| 18_I | 32_I | 1.033 | 0.93 | |
| 13_V | 18_I | 1.031 | 0.93 | |
| 24_S | 27_E | 1.017 | 0.92 | |
| 7_K | 12_L | 1.016 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4hr7B | 4 | 0.9936 | 100 | 0.267 | Contact Map | 0.865 |
| 3va7A | 1 | 0.9359 | 99.8 | 0.599 | Contact Map | 0.576 |
| 2qf7A | 2 | 0.8333 | 99.8 | 0.622 | Contact Map | 0.606 |
| 3hblA | 4 | 0.7885 | 99.8 | 0.624 | Contact Map | 0.796 |
| 3bg3A | 4 | 0.9295 | 99.7 | 0.638 | Contact Map | 0.731 |
| 3hgbA | 1 | 0.6987 | 99.7 | 0.654 | Contact Map | 0.441 |
| 3n6rA | 6 | 0.9295 | 99.6 | 0.66 | Contact Map | 0.798 |
| 3mxuA | 1 | 0.6859 | 99.6 | 0.661 | Contact Map | 0.486 |
| 3tzuA | 4 | 0.6731 | 99.6 | 0.662 | Contact Map | 0.49 |
| 1bdoA | 1 | 0.5128 | 99.6 | 0.662 | Contact Map | 0.808 |
Sequence Conservation (Image Generated using WebLogo v3)