| UniProt: | P0AB83 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10662 | ||
| Length: | 211 (206) | ||
| Sequences: | 4081 | ||
| Seq/Len: | 19.81 |
| END3
Paralog alert: 0.86 [within 20: 0.02] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 107_D | 110_A | 4.322 | 1.00 | |
| 60_T | 63_A | 3.345 | 1.00 | |
| 193_R | 196_S | 3.071 | 1.00 | |
| 95_I | 115_P | 2.88 | 1.00 | |
| 95_I | 99_Q | 2.823 | 1.00 | |
| 188_I | 193_R | 2.729 | 1.00 | |
| 100_H | 113_A | 2.673 | 1.00 | |
| 106_E | 132_W | 2.665 | 1.00 | |
| 57_V | 71_G | 2.5 | 1.00 | |
| 73_K | 83_N | 2.426 | 1.00 | |
| 72_V | 90_I | 2.278 | 1.00 | |
| 12_R | 201_D | 2.205 | 1.00 | |
| 62_A | 66_E | 2.164 | 1.00 | |
| 90_I | 94_R | 2.132 | 1.00 | |
| 37_L | 92_T | 2.112 | 1.00 | |
| 57_V | 75_Y | 2.091 | 1.00 | |
| 99_Q | 113_A | 2.086 | 1.00 | |
| 68_G | 71_G | 2.074 | 1.00 | |
| 59_N | 63_A | 2.032 | 1.00 | |
| 88_N | 91_K | 2.021 | 1.00 | |
| 74_T | 77_K | 1.968 | 1.00 | |
| 94_R | 98_E | 1.92 | 1.00 | |
| 157_E | 161_E | 1.898 | 1.00 | |
| 34_I | 89_I | 1.816 | 1.00 | |
| 108_R | 112_E | 1.789 | 1.00 | |
| 62_A | 97_L | 1.772 | 1.00 | |
| 28_S | 31_E | 1.765 | 1.00 | |
| 12_R | 202_L | 1.681 | 1.00 | |
| 69_V | 73_K | 1.671 | 1.00 | |
| 30_F | 93_C | 1.64 | 1.00 | |
| 142_F | 159_V | 1.573 | 1.00 | |
| 30_F | 61_P | 1.558 | 1.00 | |
| 91_K | 115_P | 1.557 | 1.00 | |
| 67_L | 72_V | 1.517 | 1.00 | |
| 110_A | 113_A | 1.507 | 1.00 | |
| 69_V | 90_I | 1.505 | 1.00 | |
| 53_K | 56_P | 1.501 | 1.00 | |
| 9_I | 199_I | 1.501 | 1.00 | |
| 8_E | 12_R | 1.493 | 1.00 | |
| 18_P | 171_F | 1.484 | 1.00 | |
| 151_A | 162_K | 1.466 | 1.00 | |
| 58_A | 75_Y | 1.462 | 1.00 | |
| 91_K | 94_R | 1.458 | 1.00 | |
| 187_C | 197_C | 1.455 | 1.00 | |
| 52_A | 56_P | 1.448 | 1.00 | |
| 95_I | 100_H | 1.445 | 1.00 | |
| 25_N | 52_A | 1.441 | 1.00 | |
| 27_S | 31_E | 1.441 | 1.00 | |
| 42_A | 46_S | 1.439 | 1.00 | |
| 14_R | 174_D | 1.438 | 1.00 | |
| 39_S | 44_D | 1.429 | 1.00 | |
| 167_V | 175_C | 1.363 | 0.99 | |
| 187_C | 194_C | 1.334 | 0.99 | |
| 103_E | 106_E | 1.326 | 0.99 | |
| 181_L | 185_Y | 1.317 | 0.99 | |
| 64_M | 72_V | 1.313 | 0.99 | |
| 58_A | 67_L | 1.312 | 0.99 | |
| 194_C | 203_C | 1.297 | 0.99 | |
| 33_L | 37_L | 1.292 | 0.99 | |
| 84_S | 88_N | 1.278 | 0.99 | |
| 108_R | 126_L | 1.236 | 0.98 | |
| 96_L | 104_V | 1.228 | 0.98 | |
| 87_E | 91_K | 1.226 | 0.98 | |
| 108_R | 134_T | 1.226 | 0.98 | |
| 46_S | 49_K | 1.224 | 0.98 | |
| 31_E | 55_Y | 1.224 | 0.98 | |
| 97_L | 102_G | 1.211 | 0.98 | |
| 14_R | 171_F | 1.207 | 0.98 | |
| 68_G | 90_I | 1.191 | 0.98 | |
| 84_S | 87_E | 1.176 | 0.98 | |
| 42_A | 79_I | 1.173 | 0.98 | |
| 126_L | 132_W | 1.172 | 0.98 | |
| 119_R | 160_E | 1.156 | 0.97 | |
| 2_N | 5_K | 1.156 | 0.97 | |
| 34_I | 55_Y | 1.148 | 0.97 | |
| 145_C | 163_L | 1.145 | 0.97 | |
| 153_G | 159_V | 1.131 | 0.97 | |
| 106_E | 130_F | 1.118 | 0.96 | |
| 73_K | 82_Y | 1.102 | 0.96 | |
| 17_N | 182_H | 1.093 | 0.96 | |
| 174_D | 178_W | 1.09 | 0.96 | |
| 194_C | 197_C | 1.089 | 0.96 | |
| 131_G | 173_V | 1.085 | 0.96 | |
| 169_A | 172_K | 1.079 | 0.95 | |
| 14_R | 178_W | 1.061 | 0.95 | |
| 16_N | 198_I | 1.054 | 0.95 | |
| 109_A | 112_E | 1.05 | 0.94 | |
| 31_E | 59_N | 1.048 | 0.94 | |
| 61_P | 97_L | 1.045 | 0.94 | |
| 91_K | 95_I | 1.042 | 0.94 | |
| 92_T | 114_L | 1.032 | 0.94 | |
| 171_F | 174_D | 1.029 | 0.94 | |
| 49_K | 52_A | 1.027 | 0.94 | |
| 51_T | 55_Y | 1.023 | 0.93 | |
| 127_N | 176_H | 1.016 | 0.93 | |
| 18_P | 174_D | 1.01 | 0.93 | |
| 70_E | 73_K | 1.005 | 0.93 | |
| 43_T | 46_S | 1.004 | 0.93 | |
| 100_H | 110_A | 1.002 | 0.92 | |
| 147_R | 192_P | 1.001 | 0.92 | |
| 95_I | 113_A | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2abkA | 1 | 1 | 100 | 0.153 | Contact Map | 0.777 |
| 1ornA | 1 | 1 | 100 | 0.165 | Contact Map | 0.763 |
| 3n5nX | 2 | 0.9953 | 100 | 0.196 | Contact Map | 0.706 |
| 3fspA | 1 | 0.9953 | 100 | 0.199 | Contact Map | 0.654 |
| 1kg2A | 1 | 0.981 | 100 | 0.213 | Contact Map | 0.729 |
| 1keaA | 1 | 1 | 100 | 0.221 | Contact Map | 0.705 |
| 1pu6A | 2 | 0.8863 | 100 | 0.327 | Contact Map | 0.598 |
| 3s6iA | 2 | 0.8863 | 100 | 0.45 | Contact Map | 0.505 |
| 3n0uA | 3 | 0.8957 | 100 | 0.456 | Contact Map | 0.569 |
| 3fhgA | 1 | 0.8957 | 100 | 0.464 | Contact Map | 0.63 |
Sequence Conservation (Image Generated using WebLogo v3)