| UniProt: | P0AB65 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13726 | ||
| Length: | 92 (90) | ||
| Sequences: | 2044 | ||
| Seq/Len: | 22.71 |
| ACYP
Paralog alert: 0.35 [within 20: 0.01] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 11_Y | 43_S | 2.537 | 1.00 | |
| 9_W | 43_S | 2.447 | 1.00 | |
| 26_E | 29_R | 2.366 | 1.00 | |
| 24_Q | 28_K | 2.328 | 1.00 | |
| 48_A | 58_L | 2.28 | 1.00 | |
| 18_G | 21_Y | 2.257 | 1.00 | |
| 5_C | 49_C | 2.194 | 1.00 | |
| 22_T | 61_W | 2.147 | 1.00 | |
| 11_Y | 74_R | 2.128 | 1.00 | |
| 39_L | 45_E | 2.115 | 1.00 | |
| 37_K | 45_E | 2.089 | 1.00 | |
| 8_A | 59_M | 2.073 | 1.00 | |
| 67_P | 70_A | 1.889 | 1.00 | |
| 49_C | 84_G | 1.878 | 1.00 | |
| 23_T | 62_L | 1.773 | 1.00 | |
| 5_C | 47_V | 1.737 | 1.00 | |
| 9_W | 39_L | 1.689 | 1.00 | |
| 35_Y | 92_R | 1.64 | 1.00 | |
| 32_L | 48_A | 1.621 | 1.00 | |
| 30_L | 61_W | 1.614 | 1.00 | |
| 61_W | 65_G | 1.593 | 1.00 | |
| 35_Y | 47_V | 1.577 | 1.00 | |
| 7_I | 45_E | 1.508 | 1.00 | |
| 52_E | 56_E | 1.366 | 0.99 | |
| 33_T | 88_D | 1.358 | 0.99 | |
| 66_G | 70_A | 1.339 | 0.99 | |
| 59_M | 77_S | 1.321 | 0.99 | |
| 8_A | 46_V | 1.295 | 0.99 | |
| 6_I | 79_P | 1.281 | 0.99 | |
| 48_A | 55_V | 1.277 | 0.99 | |
| 48_A | 62_L | 1.258 | 0.99 | |
| 10_V | 75_V | 1.23 | 0.98 | |
| 29_R | 61_W | 1.18 | 0.98 | |
| 8_A | 62_L | 1.178 | 0.98 | |
| 11_Y | 76_L | 1.152 | 0.97 | |
| 32_L | 50_G | 1.115 | 0.96 | |
| 49_C | 85_E | 1.103 | 0.96 | |
| 51_E | 54_Q | 1.1 | 0.96 | |
| 30_L | 54_Q | 1.078 | 0.95 | |
| 33_T | 49_C | 1.075 | 0.95 | |
| 57_K | 60_Q | 1.07 | 0.95 | |
| 10_V | 46_V | 1.056 | 0.95 | |
| 39_L | 43_S | 1.051 | 0.94 | |
| 6_I | 77_S | 1.036 | 0.94 | |
| 17_V | 20_R | 1.019 | 0.93 | |
| 24_Q | 91_I | 1.015 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4hi1A | 3 | 0.9891 | 100 | 0.04 | Contact Map | 0.769 |
| 4g9iA | 6 | 0.9674 | 100 | 0.041 | Contact Map | 0.866 |
| 2gv1A | 1 | 1 | 100 | 0.043 | Contact Map | 0.55 |
| 1w2iA | 2 | 0.9783 | 100 | 0.053 | Contact Map | 0.882 |
| 3trgA | 1 | 0.9783 | 100 | 0.055 | Contact Map | 0.785 |
| 3vthA | 2 | 0.9783 | 100 | 0.058 | Contact Map | 0.915 |
| 2bjdA | 2 | 0.9891 | 100 | 0.06 | Contact Map | 0.886 |
| 2fhmA | 1 | 0.9674 | 100 | 0.06 | Contact Map | 0.75 |
| 2lxfA | 1 | 0.9783 | 100 | 0.064 | Contact Map | 0.655 |
| 1ulrA | 1 | 0.9565 | 100 | 0.068 | Contact Map | 0.783 |
Sequence Conservation (Image Generated using WebLogo v3)