| UniProt: | P0AAZ7 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG14287 | ||
| Length: | 60 (58) | ||
| Sequences: | 632 | ||
| Seq/Len: | 10.90 |
| YCAR
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 26_E | 51_R | 4.186 | 1.00 | |
| 29_C | 32_D | 3.405 | 1.00 | |
| 14_C | 32_D | 3.001 | 1.00 | |
| 14_C | 29_C | 2.57 | 1.00 | |
| 19_W | 30_K | 2.459 | 1.00 | |
| 21_N | 24_K | 2.159 | 1.00 | |
| 35_A | 51_R | 1.821 | 1.00 | |
| 20_Y | 38_L | 1.771 | 1.00 | |
| 9_I | 45_L | 1.716 | 1.00 | |
| 5_L | 15_N | 1.702 | 1.00 | |
| 39_R | 49_E | 1.672 | 1.00 | |
| 16_G | 31_L | 1.631 | 1.00 | |
| 26_E | 35_A | 1.607 | 1.00 | |
| 20_Y | 25_Q | 1.566 | 1.00 | |
| 13_V | 47_E | 1.522 | 1.00 | |
| 26_E | 45_L | 1.273 | 0.99 | |
| 5_L | 8_I | 1.218 | 0.98 | |
| 15_N | 42_I | 1.184 | 0.98 | |
| 46_L | 49_E | 1.156 | 0.97 | |
| 10_A | 15_N | 1.085 | 0.96 | |
| 36_F | 47_E | 1.065 | 0.95 | |
| 28_I | 53_L | 1.047 | 0.94 | |
| 9_I | 17_K | 1.025 | 0.93 | |
| 13_V | 48_T | 1.003 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2hf1A | 2 | 1 | 99.8 | 0.109 | Contact Map | 0.788 |
| 2jr6A | 1 | 1 | 99.8 | 0.11 | Contact Map | 0.496 |
| 2js4A | 1 | 1 | 99.8 | 0.114 | Contact Map | 0.574 |
| 2pk7A | 2 | 1 | 99.8 | 0.118 | Contact Map | 0.779 |
| 2jnyA | 1 | 1 | 99.8 | 0.137 | Contact Map | 0.533 |
| 2k5rA | 1 | 1 | 99.8 | 0.182 | Contact Map | 0.363 |
| 2kpiA | 1 | 0.8667 | 99.7 | 0.214 | Contact Map | 0.501 |
| 3q87A | 1 | 0.8 | 98.9 | 0.5 | Contact Map | 0.223 |
| 2j6aA | 1 | 0.9 | 98.8 | 0.526 | Contact Map | 0.196 |
| 1dl6A | 1 | 0.9 | 98.6 | 0.553 | Contact Map | 0.332 |
Sequence Conservation (Image Generated using WebLogo v3)