| UniProt: | P0AAT6 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11255 | ||
| Length: | 105 (104) | ||
| Sequences: | 1527 | ||
| Seq/Len: | 14.68 |
| IOJAP
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 14_I | 51_I | 3.151 | 1.00 | |
| 14_I | 19_G | 3.031 | 1.00 | |
| 99_E | 102_K | 2.829 | 1.00 | |
| 58_E | 61_A | 2.822 | 1.00 | |
| 19_G | 40_C | 2.819 | 1.00 | |
| 42_G | 48_V | 2.138 | 1.00 | |
| 22_I | 40_C | 1.936 | 1.00 | |
| 59_S | 82_L | 1.905 | 1.00 | |
| 27_V | 34_T | 1.837 | 1.00 | |
| 54_H | 58_E | 1.667 | 1.00 | |
| 7_Q | 11_I | 1.618 | 1.00 | |
| 76_D | 91_Q | 1.599 | 1.00 | |
| 69_V | 80_V | 1.584 | 1.00 | |
| 52_A | 78_I | 1.566 | 1.00 | |
| 14_I | 55_V | 1.556 | 1.00 | |
| 66_P | 82_L | 1.54 | 1.00 | |
| 43_T | 47_H | 1.537 | 1.00 | |
| 40_C | 89_V | 1.526 | 1.00 | |
| 14_I | 40_C | 1.496 | 1.00 | |
| 52_A | 89_V | 1.483 | 1.00 | |
| 79_V | 86_I | 1.423 | 1.00 | |
| 70_E | 79_V | 1.395 | 0.99 | |
| 10_V | 82_L | 1.394 | 0.99 | |
| 56_V | 69_V | 1.389 | 0.99 | |
| 6_L | 59_S | 1.383 | 0.99 | |
| 76_D | 94_S | 1.379 | 0.99 | |
| 9_F | 62_A | 1.377 | 0.99 | |
| 9_F | 13_K | 1.339 | 0.99 | |
| 13_K | 54_H | 1.304 | 0.99 | |
| 91_Q | 94_S | 1.275 | 0.99 | |
| 67_L | 83_G | 1.27 | 0.99 | |
| 39_I | 100_L | 1.265 | 0.99 | |
| 10_V | 38_I | 1.26 | 0.99 | |
| 7_Q | 38_I | 1.254 | 0.99 | |
| 51_I | 89_V | 1.25 | 0.99 | |
| 59_S | 64_L | 1.242 | 0.98 | |
| 21_D | 41_T | 1.239 | 0.98 | |
| 11_I | 15_D | 1.221 | 0.98 | |
| 24_A | 38_I | 1.22 | 0.98 | |
| 27_V | 31_S | 1.183 | 0.98 | |
| 47_H | 50_S | 1.182 | 0.98 | |
| 53_D | 72_E | 1.178 | 0.98 | |
| 56_V | 80_V | 1.171 | 0.98 | |
| 48_V | 89_V | 1.151 | 0.97 | |
| 38_I | 85_V | 1.133 | 0.97 | |
| 42_G | 51_I | 1.128 | 0.97 | |
| 13_K | 55_V | 1.125 | 0.97 | |
| 47_H | 51_I | 1.104 | 0.96 | |
| 75_A | 78_I | 1.083 | 0.96 | |
| 57_Q | 61_A | 1.08 | 0.95 | |
| 15_D | 22_I | 1.079 | 0.95 | |
| 49_M | 75_A | 1.046 | 0.94 | |
| 11_I | 22_I | 1.043 | 0.94 | |
| 37_M | 88_H | 1.036 | 0.94 | |
| 54_H | 57_Q | 1.02 | 0.93 | |
| 57_Q | 60_R | 1.02 | 0.93 | |
| 37_M | 86_I | 1.016 | 0.93 | |
| 19_G | 51_I | 1.013 | 0.93 | |
| 48_V | 91_Q | 1.012 | 0.93 | |
| 72_E | 78_I | 1.01 | 0.93 | |
| 8_D | 11_I | 1.002 | 0.92 | |
| 48_V | 75_A | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2id1A | 2 | 1 | 100 | 0.012 | Contact Map | 0.841 |
| 2o5aA | 2 | 1 | 100 | 0.013 | Contact Map | 0.942 |
| 3upsA | 1 | 1 | 100 | 0.027 | Contact Map | 0.882 |
| 2qipA | 1 | 0.8286 | 34.5 | 0.912 | Contact Map | 0.126 |
| 3aszA | 2 | 0.6095 | 18.6 | 0.923 | Contact Map | 0.295 |
| 2wp4A | 2 | 0.7714 | 12.4 | 0.929 | Contact Map | 0.511 |
| 4ht5A | 6 | 0.6667 | 10.9 | 0.931 | Contact Map | 0.313 |
| 3fchA | 2 | 0.5905 | 9.5 | 0.933 | Contact Map | 0.292 |
| 3nbmA | 1 | 0.819 | 9 | 0.933 | Contact Map | 0.132 |
| 3ct4A | 3 | 0.8381 | 8.9 | 0.934 | Contact Map | 0.273 |
Sequence Conservation (Image Generated using WebLogo v3)