| UniProt: | P0AAS7 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG12879 | ||
| Length: | 70 (68) | ||
| Sequences: | 768 | ||
| Seq/Len: | 11.29 |
| YBCJ
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 42_D | 57_Q | 4.305 | 1.00 | |
| 60_S | 65_S | 2.742 | 1.00 | |
| 24_S | 33_A | 2.097 | 1.00 | |
| 40_K | 60_S | 2.005 | 1.00 | |
| 3_T | 67_Q | 1.974 | 1.00 | |
| 13_E | 50_R | 1.896 | 1.00 | |
| 13_E | 52_K | 1.872 | 1.00 | |
| 17_L | 53_I | 1.869 | 1.00 | |
| 41_V | 51_C | 1.746 | 1.00 | |
| 13_E | 16_D | 1.742 | 1.00 | |
| 48_R | 51_C | 1.713 | 1.00 | |
| 17_L | 66_V | 1.564 | 1.00 | |
| 11_H | 52_K | 1.558 | 1.00 | |
| 25_E | 29_Q | 1.523 | 1.00 | |
| 33_A | 61_F | 1.483 | 1.00 | |
| 22_G | 25_E | 1.471 | 1.00 | |
| 6_L | 9_H | 1.388 | 0.99 | |
| 30_A | 34_I | 1.371 | 0.99 | |
| 41_V | 46_E | 1.313 | 0.99 | |
| 13_E | 49_K | 1.284 | 0.99 | |
| 53_I | 68_V | 1.249 | 0.99 | |
| 34_I | 45_V | 1.24 | 0.98 | |
| 58_T | 67_Q | 1.187 | 0.98 | |
| 3_T | 69_V | 1.162 | 0.97 | |
| 6_L | 17_L | 1.147 | 0.97 | |
| 34_I | 37_G | 1.082 | 0.96 | |
| 15_C | 49_K | 1.08 | 0.95 | |
| 10_P | 54_V | 1.067 | 0.95 | |
| 23_W | 66_V | 1.064 | 0.95 | |
| 35_A | 49_K | 1.063 | 0.95 | |
| 40_K | 45_V | 1.063 | 0.95 | |
| 29_Q | 32_I | 1.049 | 0.94 | |
| 26_S | 31_K | 1.016 | 0.93 | |
| 4_F | 9_H | 1.011 | 0.93 | |
| 37_G | 47_T | 1.008 | 0.93 | |
| 11_H | 54_V | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1p9kA | 1 | 1 | 98.5 | 0.593 | Contact Map | 0.443 |
| 2vqeD | 1 | 1 | 98.1 | 0.643 | Contact Map | 0.644 |
| 3bbnD | 1 | 0.9857 | 97.9 | 0.657 | Contact Map | 0.562 |
| 3j20D | 1 | 1 | 97.9 | 0.659 | Contact Map | 0.561 |
| 3u5cJ | 1 | 1 | 97.8 | 0.663 | Contact Map | 0.513 |
| 1c05A | 1 | 1 | 97.8 | 0.663 | Contact Map | 0.523 |
| 3iz6C | 1 | 0.9857 | 97.8 | 0.664 | Contact Map | 0.052 |
| 4kiyD | 1 | 0.9857 | 97.8 | 0.666 | Contact Map | 0.635 |
| 1kskA | 1 | 0.8714 | 97.8 | 0.666 | Contact Map | 0.756 |
| 3zey6 | 1 | 1 | 97.8 | 0.667 | Contact Map | 0.464 |
Sequence Conservation (Image Generated using WebLogo v3)