| UniProt: | P0AA10 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10874 | ||
| Length: | 142 (142) | ||
| Sequences: | 1457 | ||
| Seq/Len: | 10.26 |
| RL13
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 14_D | 138_Q | 3.515 | 1.00 | |
| 32_L | 56_V | 3.277 | 1.00 | |
| 70_T | 90_E | 3.202 | 1.00 | |
| 25_L | 64_V | 2.936 | 1.00 | |
| 64_V | 89_F | 2.773 | 1.00 | |
| 7_K | 10_T | 2.742 | 1.00 | |
| 96_R | 99_R | 2.739 | 1.00 | |
| 75_Y | 86_Q | 2.416 | 1.00 | |
| 21_T | 61_K | 2.215 | 1.00 | |
| 125_Y | 131_N | 2.214 | 1.00 | |
| 73_V | 86_Q | 2.211 | 1.00 | |
| 53_Y | 123_K | 2.13 | 1.00 | |
| 69_R | 89_F | 2.003 | 1.00 | |
| 32_L | 105_V | 1.97 | 1.00 | |
| 69_R | 93_I | 1.969 | 1.00 | |
| 125_Y | 132_H | 1.951 | 1.00 | |
| 29_A | 104_A | 1.939 | 1.00 | |
| 75_Y | 84_I | 1.886 | 1.00 | |
| 30_T | 34_R | 1.845 | 1.00 | |
| 87_A | 92_M | 1.771 | 1.00 | |
| 93_I | 100_V | 1.77 | 1.00 | |
| 22_G | 63_A | 1.745 | 1.00 | |
| 99_R | 102_E | 1.726 | 1.00 | |
| 67_N | 71_D | 1.713 | 1.00 | |
| 88_T | 91_E | 1.695 | 1.00 | |
| 11_V | 48_V | 1.667 | 1.00 | |
| 57_L | 128_N | 1.653 | 1.00 | |
| 73_V | 88_T | 1.636 | 1.00 | |
| 35_R | 40_H | 1.62 | 1.00 | |
| 23_K | 141_D | 1.577 | 1.00 | |
| 101_I | 105_V | 1.553 | 1.00 | |
| 91_E | 95_R | 1.549 | 1.00 | |
| 41_K | 52_D | 1.53 | 1.00 | |
| 18_V | 32_L | 1.516 | 1.00 | |
| 6_A | 45_T | 1.503 | 1.00 | |
| 17_V | 57_L | 1.497 | 1.00 | |
| 5_T | 47_H | 1.495 | 1.00 | |
| 35_R | 140_L | 1.488 | 1.00 | |
| 117_A | 120_R | 1.485 | 1.00 | |
| 67_N | 70_T | 1.479 | 1.00 | |
| 89_F | 93_I | 1.475 | 1.00 | |
| 89_F | 100_V | 1.411 | 1.00 | |
| 74_Y | 89_F | 1.4 | 0.99 | |
| 35_R | 54_I | 1.396 | 0.99 | |
| 60_D | 127_G | 1.392 | 0.99 | |
| 13_R | 121_K | 1.392 | 0.99 | |
| 87_A | 95_R | 1.39 | 0.99 | |
| 102_E | 119_F | 1.376 | 0.99 | |
| 37_R | 44_Y | 1.354 | 0.99 | |
| 17_V | 55_I | 1.325 | 0.99 | |
| 21_T | 128_N | 1.324 | 0.99 | |
| 25_L | 62_V | 1.312 | 0.99 | |
| 76_H | 87_A | 1.224 | 0.98 | |
| 109_L | 119_F | 1.213 | 0.98 | |
| 31_E | 34_R | 1.211 | 0.98 | |
| 129_E | 133_A | 1.194 | 0.98 | |
| 78_T | 85_K | 1.19 | 0.98 | |
| 60_D | 126_A | 1.186 | 0.98 | |
| 59_A | 124_V | 1.177 | 0.98 | |
| 20_A | 28_L | 1.174 | 0.98 | |
| 23_K | 31_E | 1.164 | 0.97 | |
| 16_Y | 140_L | 1.162 | 0.97 | |
| 21_T | 24_T | 1.132 | 0.97 | |
| 99_R | 103_I | 1.124 | 0.97 | |
| 43_E | 50_T | 1.121 | 0.97 | |
| 7_K | 48_V | 1.098 | 0.96 | |
| 87_A | 91_E | 1.092 | 0.96 | |
| 97_P | 126_A | 1.09 | 0.96 | |
| 103_I | 106_K | 1.075 | 0.95 | |
| 50_T | 121_K | 1.071 | 0.95 | |
| 109_L | 115_G | 1.068 | 0.95 | |
| 69_R | 100_V | 1.064 | 0.95 | |
| 40_H | 52_D | 1.029 | 0.94 | |
| 59_A | 97_P | 1.005 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kixJ | 1 | 1 | 100 | 0.059 | Contact Map | 0.71 |
| 3f1fN | 1 | 0.9859 | 100 | 0.066 | Contact Map | 0.684 |
| 3v2dN | 1 | 0.9859 | 100 | 0.066 | Contact Map | 0.847 |
| 2zjrG | 1 | 0.9859 | 100 | 0.067 | Contact Map | 0.478 |
| 3bboL | 1 | 1 | 100 | 0.068 | Contact Map | 0.651 |
| 3j3wJ | 1 | 1 | 100 | 0.069 | Contact Map | 0.544 |
| 2ftcH | 1 | 1 | 100 | 0.119 | Contact Map | 0.02 |
| 3zf7O | 1 | 0.9155 | 100 | 0.309 | Contact Map | 0.379 |
| 1j3aA | 1 | 0.8169 | 100 | 0.329 | Contact Map | 0.686 |
| 1vq8J | 1 | 0.8239 | 100 | 0.336 | Contact Map | 0.44 |
Sequence Conservation (Image Generated using WebLogo v3)