| UniProt: | P0A9I1 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG13542 | ||
| Length: | 302 (289) | ||
| Sequences: | 1616 | ||
| Seq/Len: | 5.59 |
| CITE
Paralog alert: 0.41 [within 20: 0.02] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 22_G | 59_V | 4.878 | 1.00 | |
| 256_R | 275_N | 4.396 | 1.00 | |
| 205_Y | 213_G | 3.815 | 1.00 | |
| 215_L | 242_N | 3.803 | 1.00 | |
| 231_L | 240_L | 3.557 | 1.00 | |
| 253_H | 257_V | 3.235 | 1.00 | |
| 74_I | 99_V | 3.073 | 1.00 | |
| 151_A | 160_I | 2.833 | 1.00 | |
| 141_P | 170_N | 2.707 | 1.00 | |
| 214_F | 240_L | 2.41 | 1.00 | |
| 215_L | 219_A | 2.387 | 1.00 | |
| 136_A | 157_L | 2.303 | 1.00 | |
| 102_L | 114_I | 2.302 | 1.00 | |
| 162_L | 167_Y | 2.216 | 1.00 | |
| 184_F | 188_S | 2.191 | 1.00 | |
| 51_E | 54_T | 2.188 | 1.00 | |
| 56_R | 88_D | 2.173 | 1.00 | |
| 238_D | 242_N | 2.131 | 1.00 | |
| 258_V | 291_L | 2.123 | 1.00 | |
| 16_S | 241_H | 2.07 | 1.00 | |
| 167_Y | 171_L | 2.044 | 1.00 | |
| 217_E | 229_K | 1.974 | 1.00 | |
| 256_R | 274_L | 1.959 | 1.00 | |
| 14_R | 72_E | 1.949 | 1.00 | |
| 118_I | 134_L | 1.893 | 1.00 | |
| 202_D | 229_K | 1.866 | 1.00 | |
| 41_F | 59_V | 1.859 | 1.00 | |
| 147_A | 192_A | 1.837 | 1.00 | |
| 109_Q | 112_L | 1.833 | 1.00 | |
| 255_R | 295_E | 1.759 | 1.00 | |
| 74_I | 101_R | 1.751 | 1.00 | |
| 146_R | 149_E | 1.748 | 1.00 | |
| 57_R | 61_H | 1.704 | 1.00 | |
| 164_A | 203_T | 1.7 | 1.00 | |
| 207_D | 210_N | 1.651 | 1.00 | |
| 257_V | 274_L | 1.638 | 0.99 | |
| 115_E | 119_L | 1.637 | 0.99 | |
| 111_V | 136_A | 1.634 | 0.99 | |
| 79_A | 82_S | 1.615 | 0.99 | |
| 285_D | 288_R | 1.607 | 0.99 | |
| 145_T | 188_S | 1.606 | 0.99 | |
| 108_A | 149_E | 1.586 | 0.99 | |
| 212_A | 215_L | 1.581 | 0.99 | |
| 107_T | 110_D | 1.576 | 0.99 | |
| 208_A | 273_S | 1.564 | 0.99 | |
| 214_F | 239_L | 1.531 | 0.99 | |
| 24_N | 27_M | 1.53 | 0.99 | |
| 252_D | 256_R | 1.518 | 0.99 | |
| 87_N | 90_E | 1.513 | 0.99 | |
| 122_E | 156_R | 1.502 | 0.99 | |
| 77_V | 85_G | 1.496 | 0.99 | |
| 23_A | 51_E | 1.495 | 0.99 | |
| 136_A | 150_I | 1.489 | 0.99 | |
| 165_E | 282_P | 1.477 | 0.99 | |
| 145_T | 195_S | 1.476 | 0.99 | |
| 248_Q | 252_D | 1.476 | 0.99 | |
| 253_H | 290_V | 1.464 | 0.99 | |
| 209_N | 235_R | 1.462 | 0.99 | |
| 106_D | 142_L | 1.431 | 0.98 | |
| 19_F | 230_S | 1.43 | 0.98 | |
| 218_A | 243_L | 1.418 | 0.98 | |
| 165_E | 206_S | 1.402 | 0.98 | |
| 169_R | 285_D | 1.363 | 0.97 | |
| 45_D | 104_K | 1.357 | 0.97 | |
| 148_V | 195_S | 1.345 | 0.97 | |
| 247_T | 250_E | 1.341 | 0.97 | |
| 281_G | 285_D | 1.327 | 0.97 | |
| 255_R | 259_E | 1.314 | 0.97 | |
| 44_E | 104_K | 1.306 | 0.96 | |
| 38_A | 74_I | 1.305 | 0.96 | |
| 186_R | 202_D | 1.285 | 0.96 | |
| 144_I | 185_A | 1.267 | 0.96 | |
| 274_L | 279_V | 1.25 | 0.95 | |
| 289_L | 293_R | 1.242 | 0.95 | |
| 105_T | 150_I | 1.24 | 0.95 | |
| 215_L | 239_L | 1.228 | 0.95 | |
| 15_R | 241_H | 1.214 | 0.94 | |
| 102_L | 111_V | 1.211 | 0.94 | |
| 251_V | 294_A | 1.211 | 0.94 | |
| 170_N | 194_R | 1.207 | 0.94 | |
| 262_E | 288_R | 1.205 | 0.94 | |
| 263_A | 267_E | 1.202 | 0.94 | |
| 239_L | 243_L | 1.202 | 0.94 | |
| 145_T | 148_V | 1.201 | 0.94 | |
| 25_A | 58_M | 1.201 | 0.94 | |
| 138_I | 144_I | 1.191 | 0.93 | |
| 251_V | 291_L | 1.178 | 0.93 | |
| 251_V | 290_V | 1.174 | 0.93 | |
| 23_A | 48_A | 1.171 | 0.92 | |
| 115_E | 156_R | 1.17 | 0.92 | |
| 17_M | 38_A | 1.168 | 0.92 | |
| 262_E | 266_R | 1.164 | 0.92 | |
| 143_G | 147_A | 1.151 | 0.92 | |
| 61_H | 65_H | 1.148 | 0.91 | |
| 148_V | 188_S | 1.146 | 0.91 | |
| 49_L | 84_W | 1.145 | 0.91 | |
| 84_W | 87_N | 1.121 | 0.90 | |
| 140_S | 170_N | 1.112 | 0.90 | |
| 114_I | 134_L | 1.102 | 0.89 | |
| 271_V | 280_D | 1.097 | 0.89 | |
| 75_V | 92_V | 1.086 | 0.88 | |
| 77_V | 114_I | 1.081 | 0.88 | |
| 63_L | 73_T | 1.081 | 0.88 | |
| 258_V | 261_A | 1.078 | 0.88 | |
| 142_L | 146_R | 1.076 | 0.88 | |
| 246_P | 251_V | 1.074 | 0.87 | |
| 92_V | 100_V | 1.069 | 0.87 | |
| 17_M | 40_M | 1.067 | 0.87 | |
| 263_A | 266_R | 1.058 | 0.86 | |
| 24_N | 28_V | 1.053 | 0.86 | |
| 107_T | 146_R | 1.049 | 0.86 | |
| 165_E | 280_D | 1.046 | 0.85 | |
| 21_P | 233_N | 1.044 | 0.85 | |
| 194_R | 227_D | 1.038 | 0.85 | |
| 54_T | 58_M | 1.038 | 0.85 | |
| 176_S | 181_E | 1.037 | 0.85 | |
| 30_N | 233_N | 1.036 | 0.85 | |
| 138_I | 147_A | 1.035 | 0.85 | |
| 215_L | 243_L | 1.02 | 0.83 | |
| 165_E | 283_V | 1.02 | 0.83 | |
| 183_L | 224_L | 1.016 | 0.83 | |
| 19_F | 40_M | 1.014 | 0.83 | |
| 163_G | 166_D | 1.012 | 0.83 | |
| 284_I | 288_R | 1.011 | 0.83 | |
| 35_P | 71_I | 1.011 | 0.83 | |
| 29_S | 32_F | 1.009 | 0.83 | |
| 22_G | 28_V | 1.007 | 0.82 | |
| 206_S | 278_M | 1.006 | 0.82 | |
| 184_F | 187_C | 1 | 0.82 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3oyzA | 1 | 0.9868 | 100 | 0.277 | Contact Map | 0.55 |
| 1sgjA | 3 | 0.9272 | 100 | 0.279 | Contact Map | 0.798 |
| 3qqwA | 6 | 0.957 | 100 | 0.28 | Contact Map | 0.63 |
| 1u5hA | 1 | 0.8874 | 100 | 0.283 | Contact Map | 0.695 |
| 3r4iA | 6 | 0.957 | 100 | 0.297 | Contact Map | 0.614 |
| 3qllA | 3 | 0.9371 | 100 | 0.308 | Contact Map | 0.779 |
| 3cuxA | 1 | 0.9901 | 100 | 0.326 | Contact Map | 0.527 |
| 3cuzA | 1 | 0.9901 | 100 | 0.344 | Contact Map | 0.504 |
| 1p7tA | 1 | 0.9967 | 100 | 0.385 | Contact Map | 0.437 |
| 3s9zA | 1 | 0.9934 | 100 | 0.386 | Contact Map | 0.447 |
Sequence Conservation (Image Generated using WebLogo v3)