- 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase
UniProt: |
P0A9D8 |
Sequence
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Download Alignment
We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
EcoGene: |
EG10207 |
Length: |
274 (273) |
Sequences: |
490 |
Seq/Len: |
1.79 |
DAPD
Paralog alert: 0.01 [within 20: 0.00] - ratio of genomes with paralogs
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GREMLIN Results:
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
Legend: The i and j are positions as given in the UniProt sequence. Only predictions with Scaled Score = (raw_score/average(raw_scores)) > 1 are listed. For all 3L/2 predictions, click on one of the links below.
| HHsearch Results:
GREMLIN results overlayed on top 10 PDB hits:
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles
underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
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Sequence Conservation (Image Generated using WebLogo v3)
Legend: Color is used to show Hydrophobicity (Blue: Hydrophilic, Green: Neutral and Black: Hydrophobic). Amount of gaps is represented by width. |