| UniProt: | P0A8Z0 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11121 | ||
| Length: | 132 (125) | ||
| Sequences: | 1379 | ||
| Seq/Len: | 11.03 |
| YCIA
Paralog alert: 0.32 [within 20: 0.04] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 38_M | 115_F | 3.551 | 1.00 | |
| 52_G | 127_R | 2.955 | 1.00 | |
| 39_D | 56_T | 2.948 | 1.00 | |
| 35_M | 62_M | 2.716 | 1.00 | |
| 35_M | 59_V | 2.678 | 1.00 | |
| 29_I | 34_L | 2.66 | 1.00 | |
| 42_G | 117_Y | 2.62 | 1.00 | |
| 85_T | 128_A | 2.504 | 1.00 | |
| 22_D | 33_W | 2.231 | 1.00 | |
| 30_F | 36_S | 2.195 | 1.00 | |
| 23_T | 70_V | 2.188 | 1.00 | |
| 82_Q | 89_S | 2.104 | 1.00 | |
| 81_V | 91_N | 2.048 | 1.00 | |
| 45_L | 78_A | 2.035 | 1.00 | |
| 66_R | 108_Y | 1.896 | 1.00 | |
| 50_A | 88_V | 1.868 | 1.00 | |
| 10_G | 49_I | 1.781 | 1.00 | |
| 75_C | 107_R | 1.72 | 1.00 | |
| 18_A | 29_I | 1.716 | 1.00 | |
| 33_W | 36_S | 1.683 | 1.00 | |
| 16_T | 40_I | 1.682 | 1.00 | |
| 48_E | 97_K | 1.671 | 1.00 | |
| 121_D | 125_K | 1.584 | 1.00 | |
| 72_D | 98_K | 1.578 | 1.00 | |
| 109_K | 112_E | 1.531 | 1.00 | |
| 68_V | 110_A | 1.523 | 1.00 | |
| 60_E | 114_L | 1.486 | 1.00 | |
| 45_L | 80_C | 1.393 | 0.99 | |
| 93_E | 109_K | 1.373 | 0.99 | |
| 68_V | 74_V | 1.372 | 0.99 | |
| 72_D | 108_Y | 1.347 | 0.99 | |
| 69_A | 72_D | 1.337 | 0.99 | |
| 58_R | 116_K | 1.323 | 0.99 | |
| 81_V | 114_L | 1.309 | 0.99 | |
| 50_A | 54_V | 1.293 | 0.99 | |
| 49_I | 80_C | 1.249 | 0.99 | |
| 55_V | 120_V | 1.239 | 0.98 | |
| 44_I | 73_V | 1.239 | 0.98 | |
| 80_C | 88_V | 1.233 | 0.98 | |
| 11_D | 79_R | 1.218 | 0.98 | |
| 83_K | 129_L | 1.215 | 0.98 | |
| 29_I | 37_Q | 1.211 | 0.98 | |
| 43_A | 47_K | 1.177 | 0.98 | |
| 24_N | 30_F | 1.173 | 0.98 | |
| 81_V | 89_S | 1.167 | 0.97 | |
| 86_T | 126_P | 1.147 | 0.97 | |
| 46_A | 54_V | 1.141 | 0.97 | |
| 24_N | 31_G | 1.14 | 0.97 | |
| 26_N | 120_V | 1.138 | 0.97 | |
| 89_S | 114_L | 1.117 | 0.96 | |
| 60_E | 89_S | 1.101 | 0.96 | |
| 91_N | 114_L | 1.099 | 0.96 | |
| 92_I | 115_F | 1.085 | 0.96 | |
| 33_W | 37_Q | 1.081 | 0.95 | |
| 16_T | 37_Q | 1.073 | 0.95 | |
| 96_V | 108_Y | 1.067 | 0.95 | |
| 76_C | 92_I | 1.064 | 0.95 | |
| 79_R | 91_N | 1.063 | 0.95 | |
| 89_S | 116_K | 1.054 | 0.95 | |
| 69_A | 124_G | 1.015 | 0.93 | |
| 22_D | 37_Q | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3b7kA | 3 | 0.9773 | 100 | 0.36 | Contact Map | 0.719 |
| 2qq2A | 12 | 0.9924 | 99.9 | 0.451 | Contact Map | 0.857 |
| 1y7uA | 3 | 0.9773 | 99.9 | 0.455 | Contact Map | 0.793 |
| 4ienA | 4 | 0.9697 | 99.9 | 0.457 | Contact Map | 0.82 |
| 2q2bA | 2 | 0.9773 | 99.9 | 0.457 | Contact Map | 0.871 |
| 2gvhA | 3 | 0.9773 | 99.9 | 0.464 | Contact Map | 0.759 |
| 1vpmA | 3 | 0.9773 | 99.9 | 0.47 | Contact Map | 0.893 |
| 3bjkA | 6 | 1 | 99.9 | 0.488 | Contact Map | 0.908 |
| 2v1oA | 6 | 0.8864 | 99.8 | 0.503 | Contact Map | 0.829 |
| 3d6lA | 1 | 0.9621 | 99.8 | 0.511 | Contact Map | 0.761 |
Sequence Conservation (Image Generated using WebLogo v3)