| UniProt: | P0A8R4 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG11664 | ||
| Length: | 72 (69) | ||
| Sequences: | 466 | ||
| Seq/Len: | 6.75 |
| SLYX
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 9_R | 14_E | 4.233 | 1.00 | |
| 22_I | 26_E | 2.778 | 1.00 | |
| 34_H | 41_L | 2.321 | 1.00 | |
| 28_N | 32_T | 2.23 | 1.00 | |
| 35_E | 39_A | 2.113 | 1.00 | |
| 15_S | 18_A | 2.007 | 1.00 | |
| 38_M | 41_L | 1.911 | 1.00 | |
| 37_E | 42_R | 1.805 | 1.00 | |
| 29_V | 32_T | 1.537 | 0.99 | |
| 54_A | 57_P | 1.469 | 0.99 | |
| 41_L | 45_L | 1.453 | 0.99 | |
| 7_E | 11_A | 1.35 | 0.98 | |
| 33_A | 37_E | 1.349 | 0.98 | |
| 25_E | 29_V | 1.344 | 0.98 | |
| 16_R | 21_E | 1.286 | 0.97 | |
| 31_V | 35_E | 1.254 | 0.97 | |
| 23_T | 27_L | 1.25 | 0.97 | |
| 20_Q | 24_I | 1.241 | 0.96 | |
| 44_H | 49_T | 1.232 | 0.96 | |
| 51_K | 61_A | 1.171 | 0.95 | |
| 34_H | 38_M | 1.16 | 0.94 | |
| 10_L | 14_E | 1.155 | 0.94 | |
| 33_A | 41_L | 1.149 | 0.94 | |
| 65_E | 68_P | 1.136 | 0.93 | |
| 69_P | 72_Y | 1.113 | 0.92 | |
| 62_S | 65_E | 1.065 | 0.90 | |
| 40_K | 43_D | 1.034 | 0.88 | |
| 15_S | 19_F | 1.026 | 0.88 | |
| 23_T | 58_S | 1.021 | 0.87 | |
| 51_K | 54_A | 1.021 | 0.87 | |
| 33_A | 36_M | 1.02 | 0.87 | |
| 37_E | 43_D | 1.003 | 0.86 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 3efgA | 1 | 1 | 99.9 | 0.041 | Contact Map | 0.393 |
| 2ykoA | 3 | 0.9722 | 78.4 | 0.8 | Contact Map | 0.537 |
| 1fzcC | 2 | 0.9444 | 74.7 | 0.807 | Contact Map | 0.425 |
| 1lwuC | 4 | 1 | 64.9 | 0.82 | Contact Map | 0.316 |
| 3c9iA | 6 | 1 | 59.1 | 0.826 | Contact Map | 0.475 |
| 1fxkC | 1 | 0.7361 | 43.9 | 0.841 | Contact Map | 0.365 |
| 1deqA | 4 | 1 | 42 | 0.843 | Contact Map | 0.082 |
| 4b86A | 6 | 0.7917 | 39.8 | 0.845 | Contact Map | 0.553 |
| 1m1jC | 2 | 1 | 39.1 | 0.845 | Contact Map | 0.503 |
| 1go4E | 4 | 0.8472 | 35.5 | 0.849 | Contact Map | 0.541 |
Sequence Conservation (Image Generated using WebLogo v3)