| UniProt: | P0A7Y8 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10862 | ||
| Length: | 119 (112) | ||
| Sequences: | 1329 | ||
| Seq/Len: | 11.87 |
| RNPA
Paralog alert: 0.00 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 46_R | 84_D | 3.73 | 1.00 | |
| 64_R | 68_L | 3.185 | 1.00 | |
| 71_E | 75_L | 3.1 | 1.00 | |
| 63_N | 66_K | 3.009 | 1.00 | |
| 49_L | 69_T | 2.959 | 1.00 | |
| 71_E | 74_R | 2.813 | 1.00 | |
| 97_D | 100_A | 2.618 | 1.00 | |
| 66_K | 70_R | 2.387 | 1.00 | |
| 51_V | 65_I | 2.119 | 1.00 | |
| 47_I | 73_F | 2.044 | 1.00 | |
| 18_F | 48_G | 1.985 | 1.00 | |
| 59_A | 63_N | 1.917 | 1.00 | |
| 15_P | 19_T | 1.903 | 1.00 | |
| 87_V | 105_L | 1.868 | 1.00 | |
| 76_R | 106_E | 1.81 | 1.00 | |
| 30_T | 104_A | 1.775 | 1.00 | |
| 76_R | 102_S | 1.764 | 1.00 | |
| 32_Q | 96_L | 1.703 | 1.00 | |
| 14_T | 17_Q | 1.601 | 1.00 | |
| 68_L | 101_L | 1.49 | 1.00 | |
| 32_Q | 104_A | 1.454 | 1.00 | |
| 30_T | 107_K | 1.444 | 1.00 | |
| 28_A | 37_G | 1.439 | 1.00 | |
| 29_G | 90_K | 1.404 | 0.99 | |
| 49_L | 73_F | 1.373 | 0.99 | |
| 10_L | 77_Q | 1.351 | 0.99 | |
| 72_S | 98_N | 1.342 | 0.99 | |
| 12_L | 21_V | 1.309 | 0.99 | |
| 40_N | 84_D | 1.308 | 0.99 | |
| 20_F | 38_R | 1.296 | 0.99 | |
| 36_L | 88_V | 1.265 | 0.99 | |
| 68_L | 72_S | 1.257 | 0.99 | |
| 27_R | 34_T | 1.252 | 0.99 | |
| 58_R | 61_E | 1.247 | 0.99 | |
| 68_L | 98_N | 1.236 | 0.98 | |
| 21_V | 86_V | 1.236 | 0.98 | |
| 96_L | 104_A | 1.235 | 0.98 | |
| 98_N | 102_S | 1.215 | 0.98 | |
| 102_S | 106_E | 1.209 | 0.98 | |
| 22_F | 50_T | 1.179 | 0.98 | |
| 37_G | 83_M | 1.161 | 0.97 | |
| 75_L | 102_S | 1.144 | 0.97 | |
| 10_L | 44_H | 1.143 | 0.97 | |
| 39_L | 83_M | 1.117 | 0.96 | |
| 25_P | 38_R | 1.081 | 0.95 | |
| 30_T | 108_L | 1.068 | 0.95 | |
| 69_T | 87_V | 1.055 | 0.95 | |
| 61_E | 95_D | 1.041 | 0.94 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 2ljpA | 1 | 1 | 100 | 0.05 | Contact Map | 0.446 |
| 1nz0A | 4 | 0.9496 | 100 | 0.099 | Contact Map | 0.893 |
| 1d6tA | 1 | 0.958 | 100 | 0.122 | Contact Map | 0.596 |
| 1a6fA | 1 | 0.9664 | 100 | 0.125 | Contact Map | 0.853 |
| 2bx2L | 1 | 0.8739 | 31.7 | 0.894 | Contact Map | 0.387 |
| 2j5aA | 1 | 0.3866 | 6.9 | 0.922 | Contact Map | 0.596 |
| 4bqmA | 2 | 0.395 | 5.2 | 0.926 | Contact Map | 0.662 |
| 1cqmA | 2 | 0.3361 | 5.1 | 0.927 | Contact Map | 0.76 |
| 3r3tA | 2 | 0.3529 | 4.4 | 0.929 | Contact Map | 0.726 |
| 4glwA | 2 | 0.4286 | 1.9 | 0.941 | Contact Map | 0.099 |
Sequence Conservation (Image Generated using WebLogo v3)