| UniProt: | P0A7Y4 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10860 | ||
| Length: | 155 (144) | ||
| Sequences: | 1910 | ||
| Seq/Len: | 13.26 |
| RNH
Paralog alert: 0.06 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 57_E | 106_R | 3.947 | 1.00 | |
| 101_V | 105_Q | 3.851 | 1.00 | |
| 86_K | 108_D | 3.737 | 1.00 | |
| 72_Q | 76_Q | 3.71 | 1.00 | |
| 76_Q | 80_Q | 3.546 | 1.00 | |
| 66_I | 119_E | 3.54 | 1.00 | |
| 54_V | 57_E | 3.242 | 1.00 | |
| 7_I | 55_A | 3.034 | 1.00 | |
| 126_G | 131_E | 2.921 | 1.00 | |
| 14_L | 138_R | 2.78 | 1.00 | |
| 52_A | 74_V | 2.569 | 1.00 | |
| 34_T | 132_R | 2.521 | 1.00 | |
| 14_L | 142_M | 2.296 | 1.00 | |
| 14_L | 141_A | 2.295 | 1.00 | |
| 46_R | 102_D | 2.063 | 1.00 | |
| 64_E | 115_Q | 2.044 | 1.00 | |
| 52_A | 67_L | 2.019 | 1.00 | |
| 84_N | 88_R | 1.942 | 1.00 | |
| 57_E | 110_A | 1.893 | 1.00 | |
| 3_K | 61_E | 1.751 | 1.00 | |
| 66_I | 117_K | 1.697 | 1.00 | |
| 69_T | 75_R | 1.675 | 1.00 | |
| 50_M | 54_V | 1.652 | 1.00 | |
| 12_S | 141_A | 1.617 | 1.00 | |
| 36_S | 139_A | 1.602 | 1.00 | |
| 135_E | 139_A | 1.596 | 1.00 | |
| 6_E | 27_R | 1.57 | 1.00 | |
| 122_K | 125_A | 1.517 | 1.00 | |
| 77_G | 104_W | 1.515 | 1.00 | |
| 68_S | 119_E | 1.487 | 1.00 | |
| 21_G | 141_A | 1.464 | 1.00 | |
| 4_Q | 66_I | 1.459 | 1.00 | |
| 138_R | 142_M | 1.457 | 1.00 | |
| 24_A | 55_A | 1.437 | 1.00 | |
| 22_Y | 37_A | 1.419 | 1.00 | |
| 12_S | 137_A | 1.417 | 1.00 | |
| 27_R | 129_E | 1.404 | 0.99 | |
| 111_L | 118_W | 1.367 | 0.99 | |
| 25_I | 133_C | 1.363 | 0.99 | |
| 4_Q | 64_E | 1.34 | 0.99 | |
| 9_T | 51_A | 1.321 | 0.99 | |
| 27_R | 32_E | 1.311 | 0.99 | |
| 24_A | 35_F | 1.29 | 0.99 | |
| 110_A | 113_Q | 1.279 | 0.99 | |
| 23_G | 140_A | 1.246 | 0.98 | |
| 132_R | 135_E | 1.232 | 0.98 | |
| 23_G | 136_L | 1.217 | 0.98 | |
| 36_S | 140_A | 1.216 | 0.98 | |
| 92_T | 98_V | 1.212 | 0.98 | |
| 8_F | 129_E | 1.203 | 0.98 | |
| 106_R | 110_A | 1.195 | 0.98 | |
| 22_Y | 39_Y | 1.193 | 0.98 | |
| 133_C | 140_A | 1.183 | 0.98 | |
| 8_F | 68_S | 1.179 | 0.98 | |
| 138_R | 141_A | 1.179 | 0.98 | |
| 88_R | 95_K | 1.17 | 0.97 | |
| 72_Q | 75_R | 1.165 | 0.97 | |
| 75_R | 79_T | 1.153 | 0.97 | |
| 53_I | 106_R | 1.147 | 0.97 | |
| 84_N | 87_K | 1.134 | 0.97 | |
| 21_G | 137_A | 1.129 | 0.97 | |
| 6_E | 68_S | 1.127 | 0.97 | |
| 49_L | 73_Y | 1.106 | 0.96 | |
| 6_E | 66_I | 1.091 | 0.96 | |
| 72_Q | 120_W | 1.065 | 0.95 | |
| 22_Y | 54_V | 1.064 | 0.95 | |
| 20_G | 47_M | 1.061 | 0.95 | |
| 53_I | 107_L | 1.055 | 0.95 | |
| 36_S | 136_L | 1.04 | 0.94 | |
| 125_A | 131_E | 1.037 | 0.94 | |
| 8_F | 127_H | 1.035 | 0.94 | |
| 42_T | 46_R | 1.016 | 0.93 | |
| 109_A | 112_G | 1.004 | 0.93 | |
| 39_Y | 46_R | 1.003 | 0.93 | |
| 128_P | 132_R | 1.003 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 1jl1A | 1 | 1 | 100 | 0.209 | Contact Map | 0.718 |
| 2e4lA | 1 | 1 | 100 | 0.251 | Contact Map | 0.784 |
| 3h08A | 2 | 0.9355 | 100 | 0.257 | Contact Map | 0.866 |
| 4ibnA | 1 | 0.9935 | 100 | 0.283 | Contact Map | 0.724 |
| 1rilA | 1 | 1 | 100 | 0.286 | Contact Map | 0.704 |
| 2lsnA | 1 | 0.9355 | 100 | 0.301 | Contact Map | 0.584 |
| 2qkbA | 2 | 0.9355 | 100 | 0.309 | Contact Map | 0.729 |
| 3qioA | 1 | 0.9097 | 100 | 0.325 | Contact Map | 0.61 |
| 4mh8A | 1 | 0.9742 | 100 | 0.332 | Contact Map | |
| 4hkqA | 1 | 0.9742 | 100 | 0.339 | Contact Map |
Sequence Conservation (Image Generated using WebLogo v3)