| UniProt: | P0A7X3 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10908 | ||
| Length: | 130 (130) | ||
| Sequences: | 1608 | ||
| Seq/Len: | 12.37 |
| RS9
Paralog alert: 0.05 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 118_L | 124_R | 4.022 | 1.00 | |
| 65_I | 79_I | 2.718 | 1.00 | |
| 111_V | 120_K | 2.718 | 1.00 | |
| 84_T | 104_V | 2.711 | 1.00 | |
| 88_M | 104_V | 2.515 | 1.00 | |
| 120_K | 123_R | 2.341 | 1.00 | |
| 19_V | 82_G | 2.307 | 1.00 | |
| 118_L | 125_P | 2.3 | 1.00 | |
| 36_E | 45_R | 2.295 | 1.00 | |
| 42_E | 45_R | 2.258 | 1.00 | |
| 27_K | 34_S | 2.218 | 1.00 | |
| 52_L | 63_L | 2.133 | 1.00 | |
| 34_S | 37_Q | 1.857 | 1.00 | |
| 96_S | 100_K | 1.856 | 1.00 | |
| 22_K | 64_Y | 1.829 | 1.00 | |
| 27_K | 62_D | 1.783 | 1.00 | |
| 61_L | 90_Y | 1.735 | 1.00 | |
| 26_G | 62_D | 1.729 | 1.00 | |
| 11_R | 85_R | 1.687 | 1.00 | |
| 119_R | 125_P | 1.662 | 1.00 | |
| 50_Q | 80_R | 1.662 | 1.00 | |
| 33_R | 37_Q | 1.658 | 1.00 | |
| 35_L | 45_R | 1.598 | 1.00 | |
| 119_R | 123_R | 1.571 | 1.00 | |
| 50_Q | 103_F | 1.559 | 1.00 | |
| 49_R | 58_V | 1.507 | 1.00 | |
| 88_M | 95_R | 1.507 | 1.00 | |
| 47_V | 50_Q | 1.496 | 1.00 | |
| 54_L | 101_A | 1.491 | 1.00 | |
| 57_M | 94_L | 1.458 | 1.00 | |
| 24_G | 62_D | 1.447 | 1.00 | |
| 14_S | 110_Q | 1.404 | 0.99 | |
| 112_E | 115_K | 1.399 | 0.99 | |
| 95_R | 99_R | 1.388 | 0.99 | |
| 77_G | 80_R | 1.371 | 0.99 | |
| 35_L | 48_V | 1.371 | 0.99 | |
| 67_V | 79_I | 1.367 | 0.99 | |
| 39_F | 79_I | 1.334 | 0.99 | |
| 40_G | 45_R | 1.319 | 0.99 | |
| 7_Y | 20_F | 1.312 | 0.99 | |
| 28_I | 48_V | 1.219 | 0.98 | |
| 55_V | 94_L | 1.219 | 0.98 | |
| 111_V | 114_K | 1.215 | 0.98 | |
| 53_E | 58_V | 1.2 | 0.98 | |
| 21_I | 86_A | 1.184 | 0.98 | |
| 25_N | 62_D | 1.147 | 0.97 | |
| 54_L | 97_E | 1.127 | 0.97 | |
| 73_S | 77_G | 1.119 | 0.96 | |
| 32_Q | 66_T | 1.112 | 0.96 | |
| 18_R | 66_T | 1.107 | 0.96 | |
| 55_V | 98_L | 1.095 | 0.96 | |
| 99_R | 104_V | 1.095 | 0.96 | |
| 57_M | 60_K | 1.09 | 0.96 | |
| 57_M | 61_L | 1.086 | 0.96 | |
| 11_R | 110_Q | 1.076 | 0.95 | |
| 12_R | 77_G | 1.075 | 0.95 | |
| 20_F | 66_T | 1.058 | 0.95 | |
| 90_Y | 94_L | 1.056 | 0.95 | |
| 114_K | 117_G | 1.045 | 0.94 | |
| 120_K | 124_R | 1.039 | 0.94 | |
| 119_R | 124_R | 1.033 | 0.94 | |
| 97_E | 100_K | 1.032 | 0.94 | |
| 119_R | 127_F | 1.025 | 0.93 | |
| 52_L | 57_M | 1.025 | 0.93 | |
| 15_S | 74_G | 1.008 | 0.93 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kiyI | 1 | 1 | 100 | 0.011 | Contact Map | 0.657 |
| 2vqeI | 1 | 0.9846 | 100 | 0.024 | Contact Map | 0.631 |
| 3bbnI | 1 | 1 | 100 | 0.029 | Contact Map | 0.658 |
| 4bpeI | 1 | 0.9923 | 100 | 0.067 | Contact Map | 0.522 |
| 3iz6I | 1 | 0.9923 | 100 | 0.068 | Contact Map | 0.043 |
| 3u5cQ | 1 | 0.9923 | 100 | 0.07 | Contact Map | 0.649 |
| 3j3aQ | 1 | 0.9923 | 100 | 0.074 | Contact Map | 0.559 |
| 3j20K | 1 | 0.9769 | 100 | 0.074 | Contact Map | 0.678 |
| 3zeyK | 1 | 0.9923 | 100 | 0.078 | Contact Map | 0.412 |
| 3mx7A | 1 | 0.2923 | 12.6 | 0.943 | Contact Map | 0.253 |
Sequence Conservation (Image Generated using WebLogo v3)