| UniProt: | P0A7T7 | Sequence |
Download Alignment We filter this alignment to remove sites that have > 75% gaps before running GREMLIN. |
| EcoGene: | EG10917 | ||
| Length: | 75 (73) | ||
| Sequences: | 846 | ||
| Seq/Len: | 11.59 |
| RS18
Paralog alert: 0.03 [within 20: 0.00] - ratio of genomes with paralogs |
Legend: The darker and larger the blue dots, the higher coevolution strength.
Residue pairs sorted by coevolution strength:
| i | j | Scaled Score | Prob | |
| 48_R | 51_Y | 3.729 | 1.00 | |
| 64_Y | 70_Y | 3.289 | 1.00 | |
| 14_T | 48_R | 3.229 | 1.00 | |
| 14_T | 51_Y | 2.949 | 1.00 | |
| 11_C | 14_T | 2.555 | 1.00 | |
| 33_I | 68_L | 2.45 | 1.00 | |
| 11_C | 51_Y | 2.334 | 1.00 | |
| 12_R | 47_T | 1.889 | 1.00 | |
| 47_T | 55_L | 1.887 | 1.00 | |
| 11_C | 48_R | 1.854 | 1.00 | |
| 39_I | 59_I | 1.752 | 1.00 | |
| 12_R | 16_E | 1.689 | 1.00 | |
| 21_I | 58_A | 1.676 | 1.00 | |
| 26_I | 67_L | 1.651 | 1.00 | |
| 21_I | 55_L | 1.554 | 1.00 | |
| 18_V | 28_T | 1.478 | 1.00 | |
| 49_A | 53_R | 1.477 | 1.00 | |
| 18_V | 54_Q | 1.423 | 1.00 | |
| 25_D | 28_T | 1.359 | 0.99 | |
| 22_D | 61_R | 1.236 | 0.98 | |
| 12_R | 31_N | 1.228 | 0.98 | |
| 22_D | 58_A | 1.188 | 0.98 | |
| 14_T | 19_Q | 1.167 | 0.97 | |
| 27_A | 30_K | 1.141 | 0.97 | |
| 13_F | 51_Y | 1.124 | 0.97 | |
| 21_I | 65_L | 1.092 | 0.96 | |
| 36_S | 48_R | 1 | 0.92 |
- Text file of predictions (all 3L/2 predictions)
- Generate restraints for ROSETTA Structure Modeling
Legend: Blue filled circles are GREMLIN results (Scaled_score >1). The grey/red filled circles underneath are pdb residue contacts (min distance < 5 Angstroms). The shade of the circles is based on 10 HHsearch results which uses the overall probability and per-site alignment prob. Inter oligomeric contacts in the pdb are in shades of red.
| PDB | Chains | Cov | P(%) | HHΔ | Acc | |
| 4kiyR | 1 | 1 | 100 | 0.105 | Contact Map | 0.705 |
| 2vqeR | 1 | 0.9867 | 99.9 | 0.158 | Contact Map | 0.513 |
| 3bbnR | 1 | 0.9733 | 99.9 | 0.203 | Contact Map | 0.661 |
| 4geqE | 2 | 0.3333 | 6 | 0.924 | Contact Map | 1 |
| 2xzfA | 1 | 0.4933 | 5.8 | 0.924 | Contact Map | 0.733 |
| 3h0gA | 2 | 0.8533 | 4.7 | 0.928 | Contact Map | 0.326 |
| 3u6pA | 1 | 0.48 | 4.5 | 0.928 | Contact Map | 0.762 |
| 1k82A | 4 | 0.48 | 4.4 | 0.929 | Contact Map | 0.762 |
| 1k3xA | 1 | 0.48 | 4.1 | 0.93 | Contact Map | 0.762 |
| 1twfA | 1 | 0.8533 | 3.5 | 0.932 | Contact Map | 0.412 |
Sequence Conservation (Image Generated using WebLogo v3)